| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0024 |
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| Symbol | |
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| ID | 3705957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 20172 |
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| End bp | 21842 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637736548 |
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| Product | DNA/RNA non-specific endonuclease |
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| Protein accession | YP_342096 |
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| Protein GI | 77163571 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1229] Formylmethanofuran dehydrogenase subunit A |
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| TIGRFAM ID | [TIGR03121] formylmethanofuran dehydrogenase subunit A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCATTA AACTCACCGG CGGTACCGTT TATGATCCCA TGCATGGGAT TAATGGCGAA
GTTCGTGATA TTTATATCCG AGATGGCCGC ATTATCAATC CCCCCCCCGG CGATATGTCT
ATCGATCAAG AGTATCCCTT AAATAATAAA ATTATCATGG CTGGAGCGAT CGATATCCAT
AGTCATATCG GTGGAGGTAA CGTTAATATC GCCCGAACAT TGCTGCCGGA GGGTCATCAC
ACTAATTTAT TACCCCGTAC TGAACTATTA CGCGCAGGAT CTGGCCGCGC GATTCCCAGC
ACCTTCGCTA CCGGTTATCG TTATGCGGAA ATGGGTTATA CGGCGGTCTT CGAACCTGCC
GTATTACCTA TGAATGCCCG CCAAGCCCAC ATGGAAATGG GGGATACTCC CTTGGTAGAC
AAAGGTGGCT ATGCCTTATT GGGTAATGAT GATTATGGGT TACGGATGTT GGCAGCTAAT
AAGGATCAAA AAACCTTTAA CAATTACGTG GCCTGGATTC TCAAAGCCAG CCAGTGTCTA
GGTATCAAAG TAGTCAATCC AGGTGGAATT AATGCCTTCA AATTCAATCA ACGCCGCCTC
GATCTGGATG AACCAGGTCC CTTTTATGGG GTTACACCAC GACAAATATT GCTTCGCCTC
GCACGTGCAG TACATGAATT GGATATTCCT CACCCCATTC ATGTCCATGG CTGTAACTTG
GGAGTACCAG GCAATCTAAA AACCACTTTA AGCACTATTG AGGGGATCGC GGGCCTCCCT
ATGCATCTTG CCCATATTCA ATTTCATAGT TACGGCGCTG AAGGTGATCG GAAATTCTCA
TCAGGGGCAG CTCAAATTGC AGAAGCGGTA AATAGACACC CGAATATTAC CGTTGATGTC
GGTCAAATTC TGTTTGGGCA AACGGTAACC GTATCCAGTG ACACCATGCA GCAATATGCC
AGCCATCCCC ATGCTTATCC TAAGAAATGG GCCTTCATGG ATATTGAATG TGACGCTGGC
TGCGGTATTG TCCCTTTTAA GTACCAAGAC AAGCATTTTG TTAATGCTCT CCAGTGGGCT
ATTGGCTTAG AGATCTTTCT TTTAGTGGAT GATCCCTGGC GGGTTTTTCT TACGACTGAT
CATCCTAATG GTGCCCCTTT TGTTTCTTAC CCTCATCTTA TCCGGCTATT AATGGACCGA
AGTTTCCGTA ATGATATGTT AGCCACTATC CATCCGGAGG CTGCCCAGGC CAGTACTTTA
GGCACTATTA CCCGGGAATA TTCTCTTTAT GAGATTGCTA TCATGACCCG GGCTGGAGCG
GCTAAACTGC TTGGTCTTTC AGACCGAGGG CATCTAGGTA TTGGGGCAGC CGCTGATATT
ACCGTCTACA CGGAGCAAAA AGACAAGGAA AAAATGTTTT CTAAACCCGA CTATGTCTTT
AAGGATGGGG AACTCGTCGT TAGAAACGGG GAAATCGTCA AGGTCACTTG GGGCGCAACC
CATGTAGTCC GGCCGGAGTT CGATAATAGT ATAGAAAAAG AGCTTTCCAG CTACTTTGAT
CGTTATCTTC CCATGAAGAT TAGCAATTTT AAAATAAACG ATGAGGAAAT GACTTATTTC
GGGCGAGGTC ATATCCAAGT TCATCCCTGC CGGGAGAGGA ATAGCTTCTG A
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| Protein sequence | MLIKLTGGTV YDPMHGINGE VRDIYIRDGR IINPPPGDMS IDQEYPLNNK IIMAGAIDIH
SHIGGGNVNI ARTLLPEGHH TNLLPRTELL RAGSGRAIPS TFATGYRYAE MGYTAVFEPA
VLPMNARQAH MEMGDTPLVD KGGYALLGND DYGLRMLAAN KDQKTFNNYV AWILKASQCL
GIKVVNPGGI NAFKFNQRRL DLDEPGPFYG VTPRQILLRL ARAVHELDIP HPIHVHGCNL
GVPGNLKTTL STIEGIAGLP MHLAHIQFHS YGAEGDRKFS SGAAQIAEAV NRHPNITVDV
GQILFGQTVT VSSDTMQQYA SHPHAYPKKW AFMDIECDAG CGIVPFKYQD KHFVNALQWA
IGLEIFLLVD DPWRVFLTTD HPNGAPFVSY PHLIRLLMDR SFRNDMLATI HPEAAQASTL
GTITREYSLY EIAIMTRAGA AKLLGLSDRG HLGIGAAADI TVYTEQKDKE KMFSKPDYVF
KDGELVVRNG EIVKVTWGAT HVVRPEFDNS IEKELSSYFD RYLPMKISNF KINDEEMTYF
GRGHIQVHPC RERNSF
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