Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0002 |
Symbol | |
ID | 3704430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2396 |
End bp | 3499 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637736540 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_342088 |
Protein GI | 77163563 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTT CCATTAAAAG AGAAGAAATT GTTAGGCACT TAGTAACCGT TTGTGGCGTA GTAGAACGAC GCCATACACT GCCTATACTC TCCAACGTTC TCCTTTCGGT TAAAGATTCA CAGCTTTCTC TGATGGCGAC TGATCTTGAA ATTGAAATAA GGACTGCCCT TAAGGTTTTA TCTTCAGAAG AAGGCAAAGT AACCGTTTCG GCAAGGAAAT TCTTAGAAAT TTGTCGTGCC CTTCCTTCTG GATCAGCATT AGAAGCTCAG TATAAAGAAG GACAATTTTA TATTCATTCT GGTCGCAGCC GGTTTACGCT TAGCACTCTT CCTGCTGAGG ATTTTCCAAG TATCGATAGC ATTGATGCGG TAGCAGAATT AGAACTGACC CAAGCAGAGC TAAAACAATT ATTGCATCGG ACGGTCTTTT GTATGGCTCA TCAGGATGTC CGTTACTATC TTAATGGTTT ATTATTGGAG CTGACGGAAG AATCTATCCA TGCGGTTGCT ACAGATGGGC ATCGTCTTGC GCTAGCTTCT TTAGCAAAAG GAGCGGACCA AGAGGGAACA GAAATTCAAT CTATCATTCC CCGAAAAGCA ATATTAGAGT TAGTGCGTTT GTTAGAGGAA TCGCAGGAAC CGGTACGGTT AAAATTTGGT ACTAACCAGA TGAGGGCAGA ATTCCAAGGA TTGTCCTTCT CTACCAAGCT AATTGATGGA CAATTTCCCG ACTATAAACG AGTAATACCT GTAGGTTGTG AGAAGCAATT TGTTGCTGAT CGAGAAAGAT TTAAACAGGC TTTAGTACGG GTAAATATTC TTACTAACGA CAAATATCGT GGAGTCCACT TACATTTATC AGATTTAAAG CTGCAAGCTA TAGTCACTAA CCTAGAGCAA GGGTCTGCTG AGGAAGAGCT AGATATAAAA TACCAAGGGG AGAATTTGGA AATCGTCTTT AATAATTTTT ATCTTATTGA TGTTCTTAAT ATTATTGATA CGAAAGAAGT TAGATTAACT TTTACTAATG CTAGTAGTAG TTGCCTAATT ACCCCTATTG ATGCATCTGA TAGTAAGTAT GTTGTCATGC CTATGAGATT GTAG
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Protein sequence | MRFSIKREEI VRHLVTVCGV VERRHTLPIL SNVLLSVKDS QLSLMATDLE IEIRTALKVL SSEEGKVTVS ARKFLEICRA LPSGSALEAQ YKEGQFYIHS GRSRFTLSTL PAEDFPSIDS IDAVAELELT QAELKQLLHR TVFCMAHQDV RYYLNGLLLE LTEESIHAVA TDGHRLALAS LAKGADQEGT EIQSIIPRKA ILELVRLLEE SQEPVRLKFG TNQMRAEFQG LSFSTKLIDG QFPDYKRVIP VGCEKQFVAD RERFKQALVR VNILTNDKYR GVHLHLSDLK LQAIVTNLEQ GSAEEELDIK YQGENLEIVF NNFYLIDVLN IIDTKEVRLT FTNASSSCLI TPIDASDSKY VVMPMRL
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