Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0001 |
Symbol | |
ID | 3704429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 175 |
End bp | 1524 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637736539 |
Product | chromosomal replication initiator protein, DnaA |
Protein accession | YP_342087 |
Protein GI | 77163562 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCATCCT CGCTTTGGAA GCATTGCCTC AACCACCTAG AGGGAGAACT CGATCCCCAA GAGTTCAACA CCTACATTCG CCCCTTGCAA GCAATACAAC AAGGTACTAG TTTGCAACTC TATGCGCCGA ATCAATTTGT CATTGATTGG GTACAAAACT GCGCTGAGAG CCGTATTAAT GCTTTATTAT CCCACTATAG CAGCGGTCGT ATCGAAAAGG CACTTCTTGA GGTAGGTTCT TGTAGCTTGC AGCCTCAGCC TCATATCCAA GCGGTCGAAT TAACCTCAAA ATCTGCACGC TCTTCTTCTA GAGTAGTTGA TCGGATACCT GAATCTAGAC TCAATAAAAA CTATACTTTT GATAGTTTTG TGGAGGGTAA ATCCAATCAA TTACCTCGCG CTGCTTCCCA TCAAGTTGCG GAAAATCCCG GGAGTGCCTA TAACCCTCTT TTCATTTACG GAGGGGTAGG CCTTGGCAAA ACCCATCTAA TGCATGCGGT AGGCAATTAT ATCCGAAGCC GTAATCCTAG CGCTCGGGTA GTTTATCTGC ACTCGGAACA ATTCGTTGCT GAAATGATTA AAGCCTTACA ACTTAATGCT ATCAACGAAT TTAAAACTCG TTATCGCTCA GTAGACATTC TGCTTATCGA CGATATCCAA TTTTTTGCGG GAAAAGAACG TTCTCAAGAG GAATTTTTTT ATACTTTCAA CACTTTACTT GAAGTTCAGC ATCAAATAAT CTTAACCTGT GACCGTTTTC CCAAAGAGGT CAATGGATTA GAGGAGCGAT TAACATCACG GTTTGGCTGG GGGCTAACAG TTGCTGTTGA ACCGCCAGAA TTAGAAACGC GAGTCGCAAT ATTGATGAAT AAAGCCAGCA TCGAAAATAT CATTCTATCG GATGACGTAG CGTTTTTCCT AGGGCGCCTC ATCTATTCCA ACATCCGAGA GTTAGAGGGC GCATTGCGGA GGGTGATTGC TTACTCTCGA TTTACCCACC GTCCGATTAC AATGGAACTA ACGCGTGAAG CCCTAAAAGA TCTGCTAACG CTACAAGAAA AGCTAGTCAC TATAGAGAAC ATCCAAAAAA CAGTAGCTGA GTACTATAAA ATTAGGGTTT CTGATTTATC ATCAAAACGG CGCTCACGGG TAGTAGCTCG GCCTCGGCAA ACCGCAATGT CACTTTCCAA AGAATTAACG GATCATAGTT TAACGGAAAT TGGAAAATTC TTCGGTGGTA GAGATCATAC TACCGTTCTG CACGCTTGCC GTAAAATAAA CGAGCTCAAG AGTATAGATC GTCGAATGGC CGAAGACTAT CACAATCTGC TAAAAAAGTT ATCAACTTAA
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Protein sequence | MPSSLWKHCL NHLEGELDPQ EFNTYIRPLQ AIQQGTSLQL YAPNQFVIDW VQNCAESRIN ALLSHYSSGR IEKALLEVGS CSLQPQPHIQ AVELTSKSAR SSSRVVDRIP ESRLNKNYTF DSFVEGKSNQ LPRAASHQVA ENPGSAYNPL FIYGGVGLGK THLMHAVGNY IRSRNPSARV VYLHSEQFVA EMIKALQLNA INEFKTRYRS VDILLIDDIQ FFAGKERSQE EFFYTFNTLL EVQHQIILTC DRFPKEVNGL EERLTSRFGW GLTVAVEPPE LETRVAILMN KASIENIILS DDVAFFLGRL IYSNIRELEG ALRRVIAYSR FTHRPITMEL TREALKDLLT LQEKLVTIEN IQKTVAEYYK IRVSDLSSKR RSRVVARPRQ TAMSLSKELT DHSLTEIGKF FGGRDHTTVL HACRKINELK SIDRRMAEDY HNLLKKLST
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