Gene Noc_A0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_A0030 
Symbol 
ID3704298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007483 
Strand
Start bp28840 
End bp30180 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content56% 
IMG OID637736525 
Producthypothetical protein 
Protein accessionYP_342073 
Protein GI77163547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGTA CCCGCCGCGA GCCCTTCAAG CGCCGAACGC TAGATGACAT CTTTGCAGAG 
CCTGACAGTC TTGGTCTGCT TGACGTGGGT CCTAAGCGTG CTGCCGCGCC GACCGCTAAT
CAACGATTAG TAGCCAGGCT TCAGACGATT GCGGCTTTCG TCAGCGAGCA GGGGCGCGAG
CCTACTCAGA ACGCTGATGA TCTTGGCGAG GCGACCCTGG CCGTGCAGTT GAGCGCCATA
CGCGCCAACC CTGAGCATGT GGCCGCCTTG ACCGTCTGGG ATACTCATGG GTTGCTGGAA
GCGTCAGTGG CCCGTGAGCT CCGACCCAGC GCGCTGGCAA CGACTGCATC AGCGCCAGCA
CCGCCTGTTG AAGGAGATAG CTCTGCACCT TCAACGATGC CCCCTCAACA GGAGACCACA
TCTCCCGATG CGGTCACCTC ATTGGAGGAT ATCTGGGCTA GTGATGTTCT GGGCCTATTG
GGCAGCGCTG ATGAGAACGT GGACTCGATA TTCGACCTGC AACACGTATC CAAGGTTGAA
TATAAAGACT TGCCGGACGA AATCGCGCAG CGCACCCACT GCGATGACTT TTATCGCTTC
GAGAGCCTGT TTGATGAAGT GCGCCAGGAG CTCCGCTCCG GTGATGCCGA GGCGGTGCCT
TTCCAGAGGG AGTCCCAGAT CGCTGAAGGG GATATGTTTA TTCTCAACGG CATGATCTGT
ATTACGGATC AGGTAGGCAA GGAGAGTATC GGTGCCGGCA CCAAATTCAA TCCTCGTCTG
CGCGTCGTCT ACGACAACGG TACAGAGTCT AACCTGTTGC TGCGCTCACT GGCCAGGGCG
CTCTACAAAG ACAAAGTTGG GCGGCGCATT CTGCGGCCCG ATAGCACTTT CGATGCCATG
CGCGGTATCA CGCATCGTGA CAAGCGCACC GGCATGATTT ATATCCTACG CTCGCTGAGC
CTGAATCCAG CGCTAAACGG TATACGTAAT CTTCATAAGA TCGGCTACAC TGAGAAAGAC
TTGGATGCCC GCCTAGCCAG TGCAGAAAAG CAACAAACGT ACCTCGAAGC ACCGGTCAAG
GTCGTTGCCT CCTTCGACTG CTACAACCTC GATCCACGTC GTTTCGAACG CCTCGTCCAT
ACCATGCTCC ACCATCAGCG CGTTAACGTC ACGCTCCACG ACCGCGATGG TAGCACTTAC
CGCCCTCGCG AATGGTTTGA TGTAGAGCTA GAAACCGCCC GTGAAGTGGT CAACCGTATT
GTGGATGGCA CCATCGCACA GTACCGGATG GATAACACCA CTGGAAGGTT GGTGGCGAAA
AGAGAAAAAG ACGTTGGCTG A
 
Protein sequence
MIRTRREPFK RRTLDDIFAE PDSLGLLDVG PKRAAAPTAN QRLVARLQTI AAFVSEQGRE 
PTQNADDLGE ATLAVQLSAI RANPEHVAAL TVWDTHGLLE ASVARELRPS ALATTASAPA
PPVEGDSSAP STMPPQQETT SPDAVTSLED IWASDVLGLL GSADENVDSI FDLQHVSKVE
YKDLPDEIAQ RTHCDDFYRF ESLFDEVRQE LRSGDAEAVP FQRESQIAEG DMFILNGMIC
ITDQVGKESI GAGTKFNPRL RVVYDNGTES NLLLRSLARA LYKDKVGRRI LRPDSTFDAM
RGITHRDKRT GMIYILRSLS LNPALNGIRN LHKIGYTEKD LDARLASAEK QQTYLEAPVK
VVASFDCYNL DPRRFERLVH TMLHHQRVNV TLHDRDGSTY RPREWFDVEL ETAREVVNRI
VDGTIAQYRM DNTTGRLVAK REKDVG