Gene Noc_A0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_A0012 
Symbol 
ID3704315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007483 
Strand- 
Start bp8874 
End bp9557 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID637736507 
Producthypothetical protein 
Protein accessionYP_342055 
Protein GI77163529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.418543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA AATTTTTTTC ATTGATCATC GTCGCCTTTA TCGGAGTAGC GGGATGCACC 
GTTAAGGTAG CTCCTTCTCT TGACTCCAGC CTGGGTATGG ATGCCTTCGA GAATATGCGG 
CAGATTAATA TGCGCGATGT TTCTTTGGCC CTTTATCTTG ATCCGAAGCT CAAGAACTTA 
AACGTAGAGC AGAAAATTAG AATGGGAGAA TTCTCCTTTG ACATAGGGAG AGCATTCTCG 
GCGAAATTAG TTAAAGCGCT CGCATATAAT TTTCGGACTA TCCATATTAT CGATACGCTG 
AGTTATTCTG GGCCGGAGCC AGTGGATGCG CTCATGCGCG TTAGCTTACA GGATATGGAT 
GTCAATATGG CCATGCGGAC AGGATTTGCA ACTATTTCAA CAGAGGCCTA CTCTCGCCTT 
TCCATCCGGG CAGAAATCCA GGATGCGCAA GAGAACAGAA CAATATGGGT GGGTACGACC 
CAAGCGAAGG AAGAAGGTGG ATCTCAGGAG ATGGGTCAAA TGACCTATCA AGAAGCTGGA 
AGAGGTTTTG CTTCTACCAT GAGCAGCGCG ATTGACAAAG CCATCGGCGA CCTTCTTGGT 
CAGATGAATA AATCATCCAA CTTGCACAAT TACCTAGCCA AGTGGGAGCA AAAAAATAAT 
GGAATGCCCT GTGCTCAACG CTAG
 
Protein sequence
MKNKFFSLII VAFIGVAGCT VKVAPSLDSS LGMDAFENMR QINMRDVSLA LYLDPKLKNL 
NVEQKIRMGE FSFDIGRAFS AKLVKALAYN FRTIHIIDTL SYSGPEPVDA LMRVSLQDMD 
VNMAMRTGFA TISTEAYSRL SIRAEIQDAQ ENRTIWVGTT QAKEEGGSQE MGQMTYQEAG 
RGFASTMSSA IDKAIGDLLG QMNKSSNLHN YLAKWEQKNN GMPCAQR