| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_A0007 |
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| Symbol | |
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| ID | 3704295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007483 |
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| Strand | + |
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| Start bp | 4877 |
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| End bp | 5398 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637736502 |
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| Product | putative type-4 fimbrial pilin related signal peptide protein |
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| Protein accession | YP_342050 |
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| Protein GI | 77163524 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.24859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCACA CCCACGGATT TACTCTTGCC GAGTTGATAA TAACGTTGGC AATTGCTGCT
ATTTTAACCA CAATGGCAGT ACCCTCCTTC ACCGGCGCCA TACGGACAGA CCGTTTGGTG
ACGGATACCA ATACCCTCAT TACCACTTTT ACTCTGGCCC GTACTGAGGC TATCAAGCGG
GGCATGCAAG CAGCTGTCTG TTCTGGAAGT GAGACTGCTG GCTGTGGAGG GAGCTGGAAC
GATGGCTGGA TTGTCTTTGT CGATAGTGAT GAAGACTGTG CCTACACCAC AGGCACGGAT
ACTCTACTCC GGGTCTCCCA AGGATTAGAT AACAGCACCT TGAAGGTAAA GCAGAATGGC
AGTTCAAAGG TTTGTACCGC GTTCAATTCT AGGGGCATGA ATACGACTGC TACATTTAAT
GAGGAGTTGA CCTTTACTTT GTGTAGCCCA GGTCTGGGAA AAACCAGAAT ATTAAGTATT
AATCCTGTAG GCCGGGCAAA TAAGTCAGAG GGCACGTGCT AA
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| Protein sequence | MRHTHGFTLA ELIITLAIAA ILTTMAVPSF TGAIRTDRLV TDTNTLITTF TLARTEAIKR
GMQAAVCSGS ETAGCGGSWN DGWIVFVDSD EDCAYTTGTD TLLRVSQGLD NSTLKVKQNG
SSKVCTAFNS RGMNTTATFN EELTFTLCSP GLGKTRILSI NPVGRANKSE GTC
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