Gene Noc_A0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_A0003 
Symbol 
ID3704291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007483 
Strand
Start bp2201 
End bp2569 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content51% 
IMG OID637736498 
ProductHicB 
Protein accessionYP_342046 
Protein GI77163520 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000193039 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTA AATTTGATGG CTTTACTGTC AATCTCTACC AGGATGAAGA GGATGACTGG 
CTGGCGCATT TTGTAGAAAT GTCTGAGGTT TCAGCGTTTG CCGATACTCC CGAGCAGGCA
TTAAACGAAT TGGCCGTAGC CTGGGAAGGA ATTAAGGAGA GTTATCGTAA GCATGGAGAA
GAGGTGCCCA GGGCGCCAGC TCGTAAAGAG TATAGCGGCC AATTTAACGT GAGGATTGAT
AAGCGTTTGC ATCGTAAGCT TGCCATGGAG GCCGCTAGAG CGGGGATCAG CCTTAACGCG
CTGGTGGCGC AGAAACTAGC CGAGAGCGCG GAGCATCGCA AAGCTTCTAG CGATCAGGGG
CAGCGCTAG
 
Protein sequence
MEIKFDGFTV NLYQDEEDDW LAHFVEMSEV SAFADTPEQA LNELAVAWEG IKESYRKHGE 
EVPRAPARKE YSGQFNVRID KRLHRKLAME AARAGISLNA LVAQKLAESA EHRKASSDQG
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