Gene Noc_A0001 details

Gene Information

• Locus tag: Noc_A0001
• ID: 3704289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007483
• Strand: -
• Start bp: 280
• End bp: 1080
• Gene Length: 801 bp
• Protein Length: 266 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637736496
• Product: hypothetical protein
• Protein accession: YP_342044
• Protein GI: 77163518

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000235069
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTACTA TGACACAGCC CTTGAGTGAA AATCAGCTTA GGGAAAGAGC CTCTTCAGTA 
TTCGCTACGA CAGCGCACGG CCGAGTCTCT GGCCGGTATC AGTTTATCTC TACCCTGGCC 
ATGATCGAGG CCCTTGAAAG GGAAGGATGG AGCCCGGTGC ATGCCGAGGA GAGCCGAGTT 
CGGATTCCCG ACCGAAAGGG ATTTAGCAAG CATTTACTAC GCTTCCGGCG CTTTGATAAT 
GAACTTCCCA TGGTGGGCGA TAGTTTCCCG GAAATTGTGC TTGTGAACTC CCATGATGGG 
TCATGCGCCT ACCAACTCCA TGCCGGTTTA TTCCGCTTAG TTTGCTCCAA CGGAATGATT 
GTGGCGGATT CGAATATGGG ACAGGTTAAG CGGCGGCATA CCGGCGATGT GGTTAGGGAG 
GTGATTGAGG GCACGTATGA AATTGTGGAG GAACTGCCAA GGATTGCCGC AAGGGTAGAG 
GACTTCAAAA CCCTTGAGCT TTCCCTGCAG GAGCAGGAAA TCTTTGCCGA ATCCGCTTTG 
CGGGTCCGGT GGCGGGAAGG CGAAGCACCT TGTATGCCCC AAGCGTTGCT TAGGCCCCGG 
CGGCATGAAG ACCAGGGTAA CGATTTATGG GCCACTTACC AGCGGGTACA GGAAAACATG 
CTGAAAGGGG GAATCCGCGG CAGGTCGGCT GTTGGGCGCC AGATCACCAC CCGAGCAGTC 
AAGTCGGTAG ACGGTAACGT CAAACTCAAT AAGGCGCTTT GGTTCCTCAC CGAACAAATG 
GCTGAACTTA AAAAGGCATA A 

 

Protein sequence

MRTMTQPLSE NQLRERASSV FATTAHGRVS GRYQFISTLA MIEALEREGW SPVHAEESRV 
RIPDRKGFSK HLLRFRRFDN ELPMVGDSFP EIVLVNSHDG SCAYQLHAGL FRLVCSNGMI 
VADSNMGQVK RRHTGDVVRE VIEGTYEIVE ELPRIAARVE DFKTLELSLQ EQEIFAESAL 
RVRWREGEAP CMPQALLRPR RHEDQGNDLW ATYQRVQENM LKGGIRGRSA VGRQITTRAV 
KSVDGNVKLN KALWFLTEQM AELKKA