Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2592 |
Symbol | |
ID | 3693179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 3118401 |
End bp | 3119516 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637732846 |
Product | outer membrane porin protein |
Protein accession | YP_337742 |
Protein GI | 76818094 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTTTTC AATCGAGGAA AATGATGGCC GCGCTCGTCG CGGCCGGGCC GGCGCTCGCT TGCGCGCAGA CGAGCGTCAC GCTGTACGGC CGCGTCGATG GCGGCGTCGA ATATCTGAAT CACATCGCGA AGCCGTCGGG CGGCAGCGCG TCGCGCTGGA GCGCCGAGAG CGGCGACTGG GGCACGAGCA TGTTCGGCCT GAAGGGCGCC GAGGATCTGG GCGGCCGCAC GTCGGCGATC TTCAATCTGG AAACCGCGTT CCAGGTGATG AACGGCACCA CGGGCGGCGG CCGGATGTGG TCGCGGCGCG CGTACGTCGG CTTGAAGAAC GACACGTGGG GCACGCTGCA GGCGGGCCGA AACCTCTTCA TCGACAGCGA CGGCGTGTGG GAATTCGATC CGTTCGTCCA GCAGGCGTTC TCGTCGGCGT CGCTCGTGCG CGGGCGCAAC TGGCAGCAGA CGAGCAACAA CGTCGAGTAT CACAGCCCGG TGTTCGGCGG CTTCGACGTG CAGGCGCAGT ACGCGTTCGG CAATCAGTCG CGCGGCTTCA ACTACGGCGC GCAGGGCGAC TTCGGCCGCT CGGAGGGCGT GATGGTCTCG TATCACTCGC CGCTGCTCGA CGTGCGCGGC ATCTATGACG AACTGCGCGA CAGCAACGGC CGGATGAGCA ACATCTTCTC CAGCTCGCGC GAGTATTTCA TCGGCGCGAA CGTGAAGGTG CAGAAATTCA AGATCCAGGG GGCGTACACG CATTACTCGG CGCCCGATAC GCCGGCGGGC CTCGCGGACC GCGCCGATCA CTTCTGGCTC GGCGCGACCT ATCAGGCGGA TCCGCAATGG GCGGTGACGG GCGGCGGCTA CTATGTGCGC GTGCGCGGCG GCGACGGCGG CGACGCGTCG CACGATCCGT CCGGCCACGC GATCATGTAT GCGCTCGGGA CCACTTACAA TCTGTCGAAG CGCACGTTCC TCTACGGCAC GCTCGCCTAC GTGCGCAACG GCGGGAATTC GAATTTCTCG CTGCTCGCGA CGCCGCGCGA CGCGACGCCG AACACGAGCC CGCTCGCCGG AGAATCGCAA ACGGGCGCGT ATGTCGGGAT GATGCATACG TTCTGA
|
Protein sequence | MGFQSRKMMA ALVAAGPALA CAQTSVTLYG RVDGGVEYLN HIAKPSGGSA SRWSAESGDW GTSMFGLKGA EDLGGRTSAI FNLETAFQVM NGTTGGGRMW SRRAYVGLKN DTWGTLQAGR NLFIDSDGVW EFDPFVQQAF SSASLVRGRN WQQTSNNVEY HSPVFGGFDV QAQYAFGNQS RGFNYGAQGD FGRSEGVMVS YHSPLLDVRG IYDELRDSNG RMSNIFSSSR EYFIGANVKV QKFKIQGAYT HYSAPDTPAG LADRADHFWL GATYQADPQW AVTGGGYYVR VRGGDGGDAS HDPSGHAIMY ALGTTYNLSK RTFLYGTLAY VRNGGNSNFS LLATPRDATP NTSPLAGESQ TGAYVGMMHT F
|
| |