| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2580 |
|---|
| Symbol | |
|---|
| ID | 3693855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 3104676 |
|---|
| End bp | 3106157 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637732834 |
|---|
| Product | GntR family regulatory protein |
|---|
| Protein accession | YP_337730 |
|---|
| Protein GI | 76817614 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.882118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGAT GCGTCAATAA ACTGTACTCT TGCATATCGA CAAACGGACC GGCGGGGCGG
GCAGTGAAGC GCTACGAACA ACTGGCGGAC GACATCGAGG CGATGATCCG GCGCGGCGTC
TACCGGCCGG GCGAGCGGAT ACCGTCGGTG CGGCAGGCGA GCGTGCAGCA CCGGCTCAGC
GTCACGACCG TCGTGCGCGC GTACCTGGTG CTCGAGAGCC GCGGCGCGAT CGAGAGCCGG
CCGCAGTCCG GCTATTTCGT GCGCGCGCGG CAGGATGCGC CGGCGCTCGC GCTGCATGCG
TCGGCGCCCG TCGCGGTGTC GTCGGCCGTC GACGTGAGCC GGCTCGTGCT GTCGACGCTG
CGCTCGATCG CGCGCGACGA CGCGGTGCCG CTCGGCTCGC CGTATCCGGA CGCGACGCCG
TTCCCCGCGC AGCGCATCGC GCGGCACGCG CACGCTATCG CGCGGCGGCG CGCGCGCTGG
GGCGTGATCG ACGATCTGCC GCCGGGCAAT CCGGAGCTGA TCCGGCAGAT CGCGCGCCGC
TATCTGGAAG GCGGCGTCGC GGTCGATCCG GGCGAGATCG TCGTGACGAT CGGCGCGACC
GAGGCGATCA ATTTGTGCCT GCAGGCGGTG GCCAAGCCGG GCGACACGAT CGCCGTCGAA
TCGCCGACGT TCTACGCGAT GCTGCACGCG ATCGAGCGGC TCGGGATGCG TGCGATCGAA
GTCGCGACGC ACCCGGGCGA GGGCATCGAC ATCGACGCGC TCGCGCGGAT TCTCGCGACC
GAGCGCATTG CCGCGTGCAT GGTGATGCCC AATTTCCAGA ACCCGCTCGG CTTCCTGATG
CCGGACGAGC GCAAGCGCGC GCTCGTCGAG CTGCTCGCGC GGCACGACGT GCCGGCGATC
GAAAACGACG TCTACCACGA GCTGTACTAC GGCGCCGCGC GGCCGAGCAC GCTCAAGGCG
TTCGATGCGC GCGGGCTCGT GCTGCACTGC GCGTCGTTCT CGAAAAGCCT GTCGCCCGCG
TACCGGGTCG GCTGGGCGAT GCCGGGGCGT TACCGCGATC AGGTCGAAAA GCTCAAGTTC
CTGAACACCC TCGCGACGCC CGCGATCGAC CAGCTCGCGA TCGCCGAGTA TCTGCGGCAC
GACGGCTACG ATCATCATCT GCGGCGGATT CGCAAGCTCT ATGCGCAGCA GGCGAGCATG
ATGGCGGCGC TCGTGCGGCG TTTCTTTCCG GACGGCACGC GGCTGTCGCA GCCGAAGGGC
GGCTACGTGC TATGGATCGA GCTGCCGGAC GGCGTCGACG CGATGGCGCT CTACCGGCTC
GCGCTCGCGC AGAAGATCAC GCTCGGGCCG GGGCACATGT TTTCGACGAC GCTCGCGTAT
CGGCACTGCA TCCGGCTGAA CTACAGCTAT GCGTGGTCGC CGCAGATCGA GGCGGCGGTG
AAGACGCTCG GGCGGCTGGC CGCGGTGTGC GCGAAACGAT GA
|
|---|
| Protein sequence | MVRCVNKLYS CISTNGPAGR AVKRYEQLAD DIEAMIRRGV YRPGERIPSV RQASVQHRLS
VTTVVRAYLV LESRGAIESR PQSGYFVRAR QDAPALALHA SAPVAVSSAV DVSRLVLSTL
RSIARDDAVP LGSPYPDATP FPAQRIARHA HAIARRRARW GVIDDLPPGN PELIRQIARR
YLEGGVAVDP GEIVVTIGAT EAINLCLQAV AKPGDTIAVE SPTFYAMLHA IERLGMRAIE
VATHPGEGID IDALARILAT ERIAACMVMP NFQNPLGFLM PDERKRALVE LLARHDVPAI
ENDVYHELYY GAARPSTLKA FDARGLVLHC ASFSKSLSPA YRVGWAMPGR YRDQVEKLKF
LNTLATPAID QLAIAEYLRH DGYDHHLRRI RKLYAQQASM MAALVRRFFP DGTRLSQPKG
GYVLWIELPD GVDAMALYRL ALAQKITLGP GHMFSTTLAY RHCIRLNYSY AWSPQIEAAV
KTLGRLAAVC AKR
|
|---|
| |