Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2551 |
Symbol | nlpD |
ID | 3692430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 3068204 |
End bp | 3069151 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637732806 |
Product | peptidase |
Protein accession | YP_337702 |
Protein GI | 76818068 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA GCGAGATCGA CCGCAGTGTC GCATGGTTGT CCGGCGTGGC GGCCGCGTTC GTCGTCGCGG GCTGCGCAAC CACGTCGCCC GTCACGCCGA CTGATACGCT CGCGGCCGCC GCGTCTTCGG CGAGCGCCGC GCAGCCCGCG GCCGCGCCGC CGGGCGACGC GGCGCAGCAT CCGGAGCACG CCGCCGCGCC GGCGCCGATC GCGACACGCT ACGTCGTGAG GCGCGGCGAT ACGCTGTCGG CGATCGCGCA AGCGAACGGC TGCACCGTGC GCGAGCTGCA GGCCTGGAAC CGGATGGGCC GGCGCACCCG GATCGGCATC GGCCAGGTAT TGCGGATCGC GCCGCCGGGT GCGGAAAACG CGGTCGCCTC CGAGGCGGCG GATGGCGCGG GCGCGACCCG CGCGGCCGGC AATGCAGCCG GCGCCGCGCG CGCGGCCGAT CCGGCGAGCG GCGCGGGCGG GGCGCCTGTC GCCGATGCGC CGCAGCCTGC ATCGGCGCCC GAAAGCGCCG CGGACCGGGT GGCGGACCAT CGGGTCGTCC AGGAAACGAA GCGGCACGCG CAATCGATCG CGCTCGCGTG GCCGGCGAAG GGCGCGGTCG TCGAAACGTT CCAGCCCGGC CGCAATCGCG GCATCCGGAT CGTCGGGCGC GCGGGCGATC CGGTGCGTGC CGCGGCGTCC GGCCGGGTGA TGTACGCGGG CACGGGCCTG AACGGGTACG GCACGCTGAT CCTGGTCCAG CACAACGCGG ATTTTCTGAC CGCTTACGCG CACAACCGCA AGGTGCTCGT GAAGACGGGC GACGTCGTTC AGCAGGGCGA ACAGATCGCC GAGATGGGCA CCGGCGACAG CATACGCGCC GGAATGCTGT TCGAGGTGCG GCGCGACGGC AAGCCCGTCA ATCCGATGCC GTATCTGGCG AGCCGGCAGC AGGGCTAG
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Protein sequence | MSKSEIDRSV AWLSGVAAAF VVAGCATTSP VTPTDTLAAA ASSASAAQPA AAPPGDAAQH PEHAAAPAPI ATRYVVRRGD TLSAIAQANG CTVRELQAWN RMGRRTRIGI GQVLRIAPPG AENAVASEAA DGAGATRAAG NAAGAARAAD PASGAGGAPV ADAPQPASAP ESAADRVADH RVVQETKRHA QSIALAWPAK GAVVETFQPG RNRGIRIVGR AGDPVRAAAS GRVMYAGTGL NGYGTLILVQ HNADFLTAYA HNRKVLVKTG DVVQQGEQIA EMGTGDSIRA GMLFEVRRDG KPVNPMPYLA SRQQG
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