| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2516 |
|---|
| Symbol | |
|---|
| ID | 3693612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 3033137 |
|---|
| End bp | 3034852 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637732770 |
|---|
| Product | putative DNA-binding protein |
|---|
| Protein accession | YP_337666 |
|---|
| Protein GI | 76819017 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCATGTC GAAACATGCG TAAAATCCGA CACCCGGAGC TGATTCGGTC AGCCGGCCTC
GAACTGCCGA TTGACTCGAT CCTGCTGCGG CTCGCCGGGC AGCTCGAACA GACGGCCGCA
TGGCGGCATC GCCGGCCGGC GGTGTGGGCC GGCGGTGTGG GCCGGCGCGT GCGCCGCCCG
CCCCGGTATG GCCGGCATCG CCGCCGCCGT CCGTCAGCCG CGCTCGCCCG CACCATAGAT
CAGCGAATGA TGCGCGCCCG CTGCCGCGAT CACGCCCGCG GCGGCGGCCA ACGTCGCATT
CGCCATCGGC CGCGCGACAT CCCCCGCGGC GAACACGCCG GGCACCGACG TCTGCTGCCG
TTCGTCGACG GAAAGATAGG GCCCCGTCGG TCCGTCGTCG AAAACGCAAC CGAGCCGCTC
GGGCAGATCG CAGGCCGGAA CCGTTCGGGG CGCGATGAAC AGGCCGCAGA GCGCCGCCGT
TCTACCATCG GCGAGACAGA CCGCCTCGAG CGCGGGCGCG GCGCCGACGA GCGCCGCAAC
TGGCGTTTGC TCGACCGTCA CGCCGCGAGC CGACAGCATG GCCGACTGCT CGCGCGTGGG
AACGAACGCG CCCTGAGTGA ACAGCGTGGT CGGCCCCCAG TCCGATACCA GCATTGCCTG
ATGCACGGCC TGCTCGCTGC TTGCCAGCAC GCCCATCGGC CGCCGTTCCA GTTCGTAGCC
GTGGCAATAC GGACAGTGCA GGACGCTGAC GCCCCAGCGC TCCTGAAGGC CGGGCAGCAC
AGGCAGGATG TCCCGAACGC CCGTCGCCAG GATCAGACGC CTGCCCTGCG CTTGCCGGCC
GTCAGCCAGC GAAACGCGAA ACCCGTCGCT GACGGCTGCG GCGTCGATCG CATCGCCCGC
GTCGAATTGC ACCGTGGGAT ATGCGGCGAG CTGCCGGCCC GCGGTTGCGT TGATCGCGGA
CGGCGCGTGG CCATCCTGCC CGAGAAAGCC GTGGGACGTC CGCGCAAAGC GATTGCGCGG
GCGCTTCGCG TCGATGAGCA AGACCCCGCG TCGCGCGCGG GCCAGTTGGA GGGCCGCCGC
CTGCCCGGCA AAGCTGCCTC CGATAATGAC GACATCGAAA TTCACGAGCG CTGTCTCCTT
AACGTACTTT TAAAAGTTAC GAAAGAACGC GACGTTTGTC AAATCAAAGC ACTTGCATTG
TTACGTGTGC GACGCAGTGG TAGATTGCGG TGTGATTCGG AAAGGCCCCC CACGATGCCA
CGCGACAACC GCCTGTCCCG CATGCTCCAT GTGCTGATCC ATATGGATCG GCACATGGAG
CGCGCCACCT CCGAGGCGAT CGCGAAGATG CTCGGAACGA ACCCCGTCGT CGTGCGCCGG
ATGATGGCCG GGCTGCGGGA CCAAGGCTAC GTCCGATCGG AAAAAGGCCA TGGCGGCGGC
TGGGAACTCG TCTGCGATCT GGATGCGATC ACGCTGCTTG ATGTCTACCG GGCCATCGGC
GAACCGCCGC TGTTCAGCAT CGGCCCCCAT GCCGAGCAGT CCGACTGCCT CGTCGAGAAG
GCCGTCGATG CCCGCATGAG AGAAGCGCTG GGCGAAGCGC AGGCCTTGCT GCTCGCACGT
TTCGGCGCCA TCACAGTGGG CGATCTGGCG AGGGACTTCG ACAAGCGGCA CGCCCGCCAC
AAAGCGGGGA AACGGGGGAA TTGCGCCGCG GCATAG
|
|---|
| Protein sequence | MPCRNMRKIR HPELIRSAGL ELPIDSILLR LAGQLEQTAA WRHRRPAVWA GGVGRRVRRP
PRYGRHRRRR PSAALARTID QRMMRARCRD HARGGGQRRI RHRPRDIPRG EHAGHRRLLP
FVDGKIGPRR SVVENATEPL GQIAGRNRSG RDEQAAERRR STIGETDRLE RGRGADERRN
WRLLDRHAAS RQHGRLLARG NERALSEQRG RPPVRYQHCL MHGLLAACQH AHRPPFQFVA
VAIRTVQDAD APALLKAGQH RQDVPNARRQ DQTPALRLPA VSQRNAKPVA DGCGVDRIAR
VELHRGICGE LPARGCVDRG RRVAILPEKA VGRPRKAIAR ALRVDEQDPA SRAGQLEGRR
LPGKAASDND DIEIHERCLL NVLLKVTKER DVCQIKALAL LRVRRSGRLR CDSERPPTMP
RDNRLSRMLH VLIHMDRHME RATSEAIAKM LGTNPVVVRR MMAGLRDQGY VRSEKGHGGG
WELVCDLDAI TLLDVYRAIG EPPLFSIGPH AEQSDCLVEK AVDARMREAL GEAQALLLAR
FGAITVGDLA RDFDKRHARH KAGKRGNCAA A
|
|---|
| |