Gene BURPS1710b_A2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A2472 
Symbol 
ID3692926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand- 
Start bp2989639 
End bp2990250 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID637732726 
ProductLysE family protein 
Protein accessionYP_337622 
Protein GI76818991 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.082911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTAT CCAGCCTCGC CCTCTTCGCC GCCGCCCTGC TGGTCGCCGC CGGCTCGCCC 
GGCCCGAGCA TCGCCGCGCT GGTCGCGCGC GTGCTGACCA ACGGAGTGCG CGACGTGTTG 
CCGTTCCTCG CGGCGATGTG GCTCGGCGAA GTGATCTGGC TGACCTGCGC GGTAGCCGGG 
CTCACGGCGC TCGCGCACAC GTTCGCATTC GGCTTTCTCG TGCTGAAGTT CGCGGGCATC 
GCCTACCTCG TGTTTCTCGC GTGGAAGATG TGGTTCGCGC CCGCCGATGA GCCGTCCGGC 
CAGCTCCCGC GCGGACAGTC GCCGTTGCGC ATGTTTCTGA CGGGCATCGC GGTCACGCTC 
GGCAACCCGA AAATCATGAT CTTCTATGTC GCGCTGCTGC CGACGATGGT GGATCTATCT 
CGCGCAGGGG CCGTCGCATG GCTCGAATTG ACGTTGACGC TGCTCGTCGT GTTGATCACG 
GTCGACTGCG CATGGGCATG GCTCGCGGCG CGCGCCCGCA AGCTGCTGAC GAGCCGCCGC 
GCGATGAAGG CGGCGAATCG CGCGAGCGCG GCCGCGATGG CGGGCGCCGC CGTCGCGATC 
GCGATGCGCT GA
 
Protein sequence
MSLSSLALFA AALLVAAGSP GPSIAALVAR VLTNGVRDVL PFLAAMWLGE VIWLTCAVAG 
LTALAHTFAF GFLVLKFAGI AYLVFLAWKM WFAPADEPSG QLPRGQSPLR MFLTGIAVTL 
GNPKIMIFYV ALLPTMVDLS RAGAVAWLEL TLTLLVVLIT VDCAWAWLAA RARKLLTSRR 
AMKAANRASA AAMAGAAVAI AMR