Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2365 |
Symbol | |
ID | 3694030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2868981 |
End bp | 2870120 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637732619 |
Product | porin |
Protein accession | YP_337515 |
Protein GI | 76817381 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.130283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACATT CGGCCCGCCT GCTGGCCTGC GGCGCGCTCT GCGTCACCGC CGCGCATGCG CACGCGCAAT CGAGCGTCAC GCTATACGGC ATCGTCGACA CCGGCATCGA ATTCGTTTCG CACGCGAGCG CGAAGGGCGG TTCCGCGTGG CGCATGCCGG CCGTCACGGG CGAGCTGCCG TCGCGCTGGG GCTTGCGCGG CGTCGAGGAT CTCGGCGGTG GCTATCGCGC GCTCTTCGCG CTCGAAAGCG GCTTCAACCT GCGCGGCGGC GAGCTCGGCC AGGGCGGGCG ACTGTTCGGG CGTCAGGCAT ACGTGGGCCT GCGCGCGCCG TTCGGCACGC TCGCGTTCGG CCGGCAATAC ATGATGACTT ATGTCGCGCT GCAGGGCGCG GACATCATCG GCCCCGACAT CTATGGGCTC GGCTCGCTCG ACGCTTACAT CCCGAACGGC CGCGCGGACA ACGCGGTGAC CTATGTCGGC AGCTATCGCG GCGTGACGCT CGGCGCCGGC TATTCGTTCG GCCGCGACTC GGCAGGCACC GGCAATTCGC CGGGGCAGGG CACGTGCGTC GGCTCGGTGC CGGGGCGCGC GGTCGAATGC CGGAGCGGGT CGGCGATGCT GAAGTACGAC GCCGAGCGCT TCGGCGTGGC TGCGTCGTAC GAAGAGCAGC GCGGCGGCGC GAACGCGGCG GCGAACTTCT TCGACGGTGC CGCGCCGATG CCGATCGCAA GCAGTGCGGA CAAGGACACG CGCGCGCACG TGAGCGCGTA CGCGAACGCG GGGCCGGTCA AGCTCGGCGC GGGCTGGATC GGCCGGCGCG TGTCGACCGA CGCGCCCGCC GCGCCCGACG TGCGCACCGA TCTGTTCTTC GTCGGCGCCG CCTATCGCGC GACGCCGTTC GTGACGATCG ACGGCGAAGC CTACCGGATC GTCGATGCGC GGCACGACGC GCGCGCGACG ATGGCGACGC TGCGCGCGAG CTTCTCGCTG TCGAAGCGCA CCGCCGTCTA TGCGCAGACC GCGTACCTAT GGAACAGCGC GCACGCGCGC TATTCGGTGA GCGGCGGCGG AGGCGGCACG ATGCCCGCGG CCGGCGTCGG CCAGCTCGGC GCGATGGTCG GCGTTCGGCA CATGTTCTGA
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Protein sequence | MRHSARLLAC GALCVTAAHA HAQSSVTLYG IVDTGIEFVS HASAKGGSAW RMPAVTGELP SRWGLRGVED LGGGYRALFA LESGFNLRGG ELGQGGRLFG RQAYVGLRAP FGTLAFGRQY MMTYVALQGA DIIGPDIYGL GSLDAYIPNG RADNAVTYVG SYRGVTLGAG YSFGRDSAGT GNSPGQGTCV GSVPGRAVEC RSGSAMLKYD AERFGVAASY EEQRGGANAA ANFFDGAAPM PIASSADKDT RAHVSAYANA GPVKLGAGWI GRRVSTDAPA APDVRTDLFF VGAAYRATPF VTIDGEAYRI VDARHDARAT MATLRASFSL SKRTAVYAQT AYLWNSAHAR YSVSGGGGGT MPAAGVGQLG AMVGVRHMF
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