| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2364 |
|---|
| Symbol | mhpT |
|---|
| ID | 3693918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2867374 |
|---|
| End bp | 2868567 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637732618 |
|---|
| Product | putative 3-hydroxyphenylpropionic transporter MhpT |
|---|
| Protein accession | YP_337514 |
|---|
| Protein GI | 76817814 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.2064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGAAA AGCGCGGCGT CGCGACGACG CTCGCGTTGT GCTTCGCGAT CGCGCTGCTC
GAAGGGCTCG ATCTGCAATC GGTCGGCGTC GCGGCGCCGC GCATGGCGCG CGAGTTCGGC
CTGTCGGTCG CGCAGATGGG GTGGGCGTTC GGCGCAGGCA CGTTCGGCCT GCTGCCGGGG
GCGCTGCTTG GCGGCCGGCT CGCCGACCGG ATCGGGCGCA AGCGCGTGCT GATCGTATCG
GTGTGCACGT TCGGCTTGCT GTCGATCGCC ACCGCGCAGG CGTCGAGTTT CGCGATGCTC
GTCGTCGTGC GCGTGCTCAC GGGTGTCGGG CTCGGCGGCG CGATGCCGAA CCTGATCGCG
CTGTCGTCGG AGGCAGTCGA GCCGAGGCTG CGCGGCAGCG CGGTCAGCGC GATGTATTGC
GGAATCCCGT TCGGCGGCGT GATCGCATCG GCAATCGGCG TGCTGCTCGT GGGCGACGCG
CAGTGGCGGC ACATCTTCTA CGTCGGCGGG CTCGGGCCGT TGCTGCTCGT GCCGCTGCTC
GCGCGCTGCC TGCCGGAGTC GCGCGCGTAC CTCGACGCCG CGCGCATGGG CGGCGCGCGG
CCCGCCGCGC GCGCGGCGCT CTTCGGCGGC GGCCGCGCCT GCGCAACGCT TGCGCTTTGG
GTCAGCTACT TCTGCACGCT GATCGTCCTG TATTTCCTGC TGAACTGGCT GCCGTCGCTG
ATGGCCGCGC GCGGGCTCGG CCGCGCGGCG GTCGGCGCCG TGCAGATCGG CTTCAACGTC
GGCGGCGGGC TCGGCGCGCT CGGCATCGGG ATGCTGAGCG ACCGGCTCGG CGCGTCGCGC
GTCGTCGGCG CGATGTACGC GGGCATCGTC GCGTCGCTTG TCGCGCTCGC GCTGGCGCCG
GGTTTCGCGG GGCTCGCGGC CGCCGCGTTC GCGGCCGGCA TGTTCGTGAT CGGCGGGCAA
TCGGTGCTCT ATGCGCTCGC CGCGAGCCAT TACCCGGCGG CGATGCGCGG CACGGGCGTC
GGCGCGGCGG TCGCGGCCGG GCGGATCGGC TCGGTCGTCG GGCCGCTCGC CGCCGCGCAA
CTGCTCGCGA TGGGGCGCAG CGGGGCCGTC GTGATCGGCG CGAGCATCCC GGTCACGCTG
CTCGCCGCGG CTGCCGCGCT GCTGCTCGCG CGCCGGCCGC CCACGGCGGA CTGA
|
|---|
| Protein sequence | MTEKRGVATT LALCFAIALL EGLDLQSVGV AAPRMAREFG LSVAQMGWAF GAGTFGLLPG
ALLGGRLADR IGRKRVLIVS VCTFGLLSIA TAQASSFAML VVVRVLTGVG LGGAMPNLIA
LSSEAVEPRL RGSAVSAMYC GIPFGGVIAS AIGVLLVGDA QWRHIFYVGG LGPLLLVPLL
ARCLPESRAY LDAARMGGAR PAARAALFGG GRACATLALW VSYFCTLIVL YFLLNWLPSL
MAARGLGRAA VGAVQIGFNV GGGLGALGIG MLSDRLGASR VVGAMYAGIV ASLVALALAP
GFAGLAAAAF AAGMFVIGGQ SVLYALAASH YPAAMRGTGV GAAVAAGRIG SVVGPLAAAQ
LLAMGRSGAV VIGASIPVTL LAAAAALLLA RRPPTAD
|
|---|
| |