| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2319 |
|---|
| Symbol | mmsA |
|---|
| ID | 3693523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2817439 |
|---|
| End bp | 2819121 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637732573 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_337470 |
|---|
| Protein GI | 76819648 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGGA GCCGCGCGGC AGGCACGCGT TCGGCGCCGG CGCGGCGGAC CCGGCCCGAT
CGGCGTCGGT CCGCTTCGAT CCGCGCGGTG CGCGTTCCTC GCGCGCGCGC CGGCGCCGGC
GGCGCGACCC ATCCCACGCA ACATACGAAT TCAGGAAACA CCGCGATGAA ACACGACAGC
AACGTCACTT CCCCCCTCGG TCATCTGATC GACGGCAAGC GCGTCGACGG CGGCGAGCGC
GTCCAGCCCG TGTTCGATCC GGCGACGGGC GCATCGACGA AGCGCGTCCG CATGGCCGAC
CGCCCGAGCG TCGAGGCGGC GATCGCCGCC GCGCAGGCCG TGTATCCGGC CTGGCGCAAC
ACGCCGCCGC TCAAGCGCGC GCGGGTGATG AGCCGCTTCA AGACGCTGCT CGAGGAGCAT
GCGAACGAGC TGTGCGCGCT GATCACGGCC GAGCACGGCA AGGTGCTCGC CGATGCGATG
GGCGAGTTGC AGCGCGGGAT CGAGAACGTC GAGTACGCGA GCTACGCGCC CGAGCTGCTC
AAGGGCGAGC ACAGCAAGAA CGTCGGCCCG GCGATCGACT CGTGGAGCGA GTTCCAGGCG
CTCGGCGTGG TGGCGGGGAT CACGCCGTTC AATTTCCCGA TCATGGTGCC GCTGTGGATG
TGGCCGATGG CCGTCGCGTG CGGCAACACG TTCGTGCTGA AGCCTTCCGA GCGCACGCCG
TCGTCGACGC TGCGCATGGC CGAGCTCGCG CTCGAAGCGG GCCTGCCGCC GGGCGTGCTG
AACGTCGTGA ACGGCGACAA GGAAGCCGTC GACACGATCC TGACCGATTC GCGCGTGAAG
GCGGTGAGCT TCGTCGGCTC GACGCCGATC GCCGAGTCCA TCTACACGAC GGGCTGCGCG
CACGGCAAGC GCGTGCAGGC GCTGGGCGGC GCGAAGAACT TCGCGATCGT GATGCCGGAC
GCCGACATCG GCAACGCGGT CAACGCGCTG ATGGGCGCGG CGTACGGTTC GTGCGGCGAG
CGGTGCATGG CGATTCCGCT CGTCGTCGCG ATCGGCGACG ACACGGCGGA GCAGGTCGTC
GACGGCCTGA AGGCCGAGAT CGCGAAGATG AAGGTCGGTC CGGGCACGGG CGAGCAGGTC
GACATGGGGC CGCTCGTCAC GCGGCAGCAC TTCGAGAAGG TGACGGGCTT CGTCGAGGCG
GGCATCGCCG CGGGCGCGAC GCTCGTCGTC GACGGGCGCG GCGTGAAGGT GGACGGCCAC
GAAGGCGGCT ATTACCTCGG CCCGTGCCTG TTCGACCACG TGAAGCCCGG CATGCCGATC
TATCAGCACG AGATCTTCGG GCCGGTGCTG GGCGTCGTGC GCGTCGCGTC GCTCGCCGAG
GCGATGGCGC TCGTCGACGC GCACGAGTAC GGCAACGGCA CGTGCCTCTT CACGCGCGAC
GGCGAGGCCG CGCGCTTTTT CAGCGACAAC ATCCAGGTCG GGATGGTCGG CATCAACGTG
CCGCTGCCCG TGCCCGTTGC TTATCACTCG TTCGGCGGCT GGAAGCGCTC GCTGTTCGGC
GATCTGCACG CATACGGACC GGACGCGGTG CGCTTCTATA CGAAGCGCAA GACGATCACG
CAGCGCTGGC CGTCGGCCGG CGTGCGCGAG GGGACGGTGT TCAGCTTCCC GTCGAGCCGC
TGA
|
|---|
| Protein sequence | MRRSRAAGTR SAPARRTRPD RRRSASIRAV RVPRARAGAG GATHPTQHTN SGNTAMKHDS
NVTSPLGHLI DGKRVDGGER VQPVFDPATG ASTKRVRMAD RPSVEAAIAA AQAVYPAWRN
TPPLKRARVM SRFKTLLEEH ANELCALITA EHGKVLADAM GELQRGIENV EYASYAPELL
KGEHSKNVGP AIDSWSEFQA LGVVAGITPF NFPIMVPLWM WPMAVACGNT FVLKPSERTP
SSTLRMAELA LEAGLPPGVL NVVNGDKEAV DTILTDSRVK AVSFVGSTPI AESIYTTGCA
HGKRVQALGG AKNFAIVMPD ADIGNAVNAL MGAAYGSCGE RCMAIPLVVA IGDDTAEQVV
DGLKAEIAKM KVGPGTGEQV DMGPLVTRQH FEKVTGFVEA GIAAGATLVV DGRGVKVDGH
EGGYYLGPCL FDHVKPGMPI YQHEIFGPVL GVVRVASLAE AMALVDAHEY GNGTCLFTRD
GEAARFFSDN IQVGMVGINV PLPVPVAYHS FGGWKRSLFG DLHAYGPDAV RFYTKRKTIT
QRWPSAGVRE GTVFSFPSSR
|
|---|
| |