| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2273 |
|---|
| Symbol | |
|---|
| ID | 3692440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 2761170 |
|---|
| End bp | 2762519 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637732527 |
|---|
| Product | outer membrane porin protein |
|---|
| Protein accession | YP_337424 |
|---|
| Protein GI | 76818078 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAGC GCCGTCGTTC GCGGCCCGGC GTGCGGCGTG CCGCGCTCCG TCATGCGTCG
CGCCGATCGC GAAGCGCAGC CCCCACGAAC ACGCATGGCC ACGCCCGGCC GGACTTCCGC
CGCGTGCTCC CCTGCTTCAC CCGCAGTACC CGCAGCAAGC CCGCGCCGGC CCGCACCGGC
GCACCCGGCG CGCGCATGCA GCCAGACGGC CGCGTGCGCG CGTCCCTAAA ACAACCCATT
CAATCGGAGA CACCGACAAT GAAAAAGCAT CGCCGCCTTG CCGGCACGAC TGCGATCTCA
GCGAGCCTCG CCGCGTGCGC GGGCCTCGCG TCCGGCCACG CGCTCGCGCA ATCGAGCGTC
ACGCTGTACG GGATCATGGA CGCGGGCATC GAATACGTGA ACCACGCGGC GCCCGACGGC
GGCGGCGCGT TCCGGATGAA ATCGGGCAAC AAGAACACTT CGCGCTGGGG TCTGCGCGGC
GTCGAGGATC TCGGCGGCGG GCTGAAGGCG GTGTTCCGGC TCGAAAGCGG GATCGATCTC
GCGAACGGCG CGTTCGACGA CGGCCCCGAC TCGATCTTCG CGCGGCGCGC GACGGTCGGC
CTCAAGGGCC AGTGGGGCGA GCTCACGCTC GGGCGCAACT TCACGCCCAC GTACGACTAC
ATGCTGCCGT TCGACCCGAT GGGCTACGCG CAGAACTATT CGTGGGCGAC GTCCTCGACG
GCCACGGGCG GCCGCAAGGA CGGCCTCTTC ACGCGCTCGT CGAACGCGGT GCGCTACGAC
GGCGCGTACG GCGGCCTGCG CTTCGGCGCG ATGTACGGCT TCGGCAACGT GCCGGGCAGC
ATGAAGACGA GCTCGAAATA CGATTTCGCG CTCGGCTACG AGAGCGGCCC GTTTGCCGCG
GTCGTCACGT TCGACCGCCA GAACGGCGCG GCCGACAGCG TGACGCCGGC GGACCCCGTC
AATTACGTGC AGGGCATTCA CGCGGGCGTC AGCTACGACT TCGGCCGCCT GAAGACGATG
GCGGGCTACC GCAACTACCG CCGCACGTAT CACACGGCGG CGGCGACGCA ATTGAGCGAC
ATGTACTGGC TCGGCGGCTC GTACGACTTC ACGCCGGCGT TCTCGCTGAC GGGCGCGCTC
TACCACCAGA ACGTCAAGGG CGGCACCGAC GCCGATCCGA CGCTCGTGTC GCTGCGCGCG
CAATACGCGC TGTCCAAGCG CACGGTGCTG TACGCGGCGG GCGGCTTCGC GATCGCCAAG
CACGGGCAGA ACGTCAGCGT GTCGCGCGAC TCGGTCGGAT ACGCGGATAC GCAGCTCGGC
GTGACCGTCG GGATGCAGCA GCGGTTCTAA
|
|---|
| Protein sequence | MRERRRSRPG VRRAALRHAS RRSRSAAPTN THGHARPDFR RVLPCFTRST RSKPAPARTG
APGARMQPDG RVRASLKQPI QSETPTMKKH RRLAGTTAIS ASLAACAGLA SGHALAQSSV
TLYGIMDAGI EYVNHAAPDG GGAFRMKSGN KNTSRWGLRG VEDLGGGLKA VFRLESGIDL
ANGAFDDGPD SIFARRATVG LKGQWGELTL GRNFTPTYDY MLPFDPMGYA QNYSWATSST
ATGGRKDGLF TRSSNAVRYD GAYGGLRFGA MYGFGNVPGS MKTSSKYDFA LGYESGPFAA
VVTFDRQNGA ADSVTPADPV NYVQGIHAGV SYDFGRLKTM AGYRNYRRTY HTAAATQLSD
MYWLGGSYDF TPAFSLTGAL YHQNVKGGTD ADPTLVSLRA QYALSKRTVL YAAGGFAIAK
HGQNVSVSRD SVGYADTQLG VTVGMQQRF
|
|---|
| |