| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2218 |
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| Symbol | dapE |
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| ID | 3693698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2701785 |
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| End bp | 2703236 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637732472 |
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| Product | M20/M25/M40 family peptidase |
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| Protein accession | YP_337369 |
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| Protein GI | 76819456 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0255073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG CCATCGCTGC CGCCATCGAC CACGACCGCC TCGCCGATTT CATCGAACGC
AAATGGAACG ACGAGATCCT GCATGCGCTG ACCGACTACA TCGCGGTGCC CGCGAAAAGC
CCCGCGTTCG ATCCCGACTG GGCGAAGCAC GGCTACATCG AGCGCGTCAT CGTCGACGCC
GCGCAGTGGG CCGAGCGGCA GCCGGTGAAG GGGCTGAGGG TCGAGGTCGT GCGGCTTGCC
GGCCGCACGC CGGTGATCTT CTTCGAGACG CCGGCGACGC GCGCGGGCAG CACCGACACG
ATCCTGCTGT ACGGCCATCT CGACAAGCAG CCCGAATTCG ACGGCTGGCG CGCGGATCTC
GGCCCGTGGA CGCCGAAGTT CGAAGGCGGC AAGCTGTACG GCCGCGGCGG CGCGGACGAC
GGCTATGCGA TCTACGCGAG CCTCGCGGCG CTCGGCGCGC TCGACGCGCA GGGCATCGGG
CGGCCGCGCT GCGTCGGCCT CATCGAGACG TGCGAGGAGT CGGGCAGCTA CGACCTGCTG
CCGTACGTCG ACGCGCTGCG CGCGCGGCTC GGCGACGTGA GCCTCGTCGT GTGTCTCGAT
TCGGGCGCGG GCAATTACGA TCAGCTTTGG CTCACGACGT CGCTGCGCGG GCTCGTATCG
GGCGATCTGC AGGTCGAGGT GCTCGAAGAG GGCGTGCACT CGGGCGTGTA CGGCGGGATC
GCGCCGTCGA GCTTCCGCGT GATGCGCCAA CTGTTCGAGC GGCTCGAGGA CGCGGCGACC
GGCAACCTGC TGCCGCCGTC GTTCCATTGC GAGGTGCCGG CGAGCCGCTT GCGCGAGACG
CAAGCGGCCG CGTCGATTCT CGGCGACGCC GTGTGGAAGG GGCTGCCGTG GGCGTGCGGG
CAGGACGGCA AGCCGGTGCT GCCGACGACC GCCGATCCGC GCGAGGCGCT CCTCAATTCG
ACGTGGCGGC CGTCGCTGTC GGTCACGGGC GCGCAGGGGT TGCCCGCGCT CGAGAATGCC
GGCAACGTGC TGCGGCCGCG CACCGCGTTC AAGCTGTCGC TGCGGCTGCC GCCGCTCGTC
GACGCCGCGC AGGCAGTGCA GCAGTTGAAG GCGCTGCTCG AGCTCGATCC GCCGTACAAC
GCGAAGGTCA CGTTCAAGCC CGATGCGGGC GCGGCGACCG GCTGGAATGC GCCGGATGTC
GCGCCCTGGC TCGGCGCGGC GCTCGACGAC GCGTCGCGCC GCCACTTCGG CGCAAACTGC
GCGTACATGG GCCTCGGCGG CACGATCCCG CTGATGAACG TGCTGCAGGA AGGCTTCCCG
TGCGCGCAAT TCATGGTGTG CGGCGTGCTC GGCCCGAAAT CGAACGCGCA CGGGCCGAAC
GAATTCCTGC ACGTGCCGTA CGCAAAGAAG CTGACGGCCG CGGTGGCCGA CGTGATCGCC
GCCGCGCATT GA
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| Protein sequence | MTTAIAAAID HDRLADFIER KWNDEILHAL TDYIAVPAKS PAFDPDWAKH GYIERVIVDA
AQWAERQPVK GLRVEVVRLA GRTPVIFFET PATRAGSTDT ILLYGHLDKQ PEFDGWRADL
GPWTPKFEGG KLYGRGGADD GYAIYASLAA LGALDAQGIG RPRCVGLIET CEESGSYDLL
PYVDALRARL GDVSLVVCLD SGAGNYDQLW LTTSLRGLVS GDLQVEVLEE GVHSGVYGGI
APSSFRVMRQ LFERLEDAAT GNLLPPSFHC EVPASRLRET QAAASILGDA VWKGLPWACG
QDGKPVLPTT ADPREALLNS TWRPSLSVTG AQGLPALENA GNVLRPRTAF KLSLRLPPLV
DAAQAVQQLK ALLELDPPYN AKVTFKPDAG AATGWNAPDV APWLGAALDD ASRRHFGANC
AYMGLGGTIP LMNVLQEGFP CAQFMVCGVL GPKSNAHGPN EFLHVPYAKK LTAAVADVIA
AAH
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