Gene BURPS1710b_A2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A2198 
Symbol 
ID3694303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2686432 
End bp2688744 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content73% 
IMG OID637732452 
Productamylo-alpha-1,6-glucosidase family 
Protein accessionYP_337349 
Protein GI76817674 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000221198 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGGC AAGCCGACCC CGCTTCCCCG CGCGCGCCGC AAGCCGCCGC GCCCGCTTCT 
TCATCCGCGC GTTGCGCCGC GCTCGGCGCG GCGCCGCCGC AATCGGCACA ACCGCCGCAA
TCGCCGCAAC CGGCCCCGTC CACGCCCGCG TTCATCGCGC CCGAGCCCGA TGCGCAGAAG
GCCGTGCGCG GCAGCCAGTT CGTGCTGAAG GCGGGCGACG CGTTCGTCGT GAGCGACGCG
CTCGGCGACA TCGCCGGGCG CGACGACGGC CTCTTCGTCG ACGACATGCG CGTGCTGTCG
CAATGGCGGC TCACGTTCGG CGGCCGCGCG CCGTCGCTGC TGTCGGGGGC GACGAGCGCG
GACAACGCGT CGTTCACCGC GCACCTGACG AACCGTCCGC TGCCGCCGCT CGGCGGCCGC
GAGACGCCCG AGGGCGTGAT CCACATCGAG CGGATGCGCG TGCTTGCCGA CAATGTGCTT
CACGAGGCGC TCACGCTGAC GAACTACGGC ACGTGCGACG CCGAGGTGCC GCTGTCGGTG
TCGTTCGGCG CGGACTTCAA GGACATGTTC GAAGTGCGCG GCTCGCGGCG CGAGCGGCGT
GGCGCGGTCG CGCCGCCGTG CGTCGAGGCG GGCGCGGTCA GGCTGCGCTA CGACGGGCTC
GACGCGGTCG AGCGCAGCGT GCGGATCGGC TTCGAGCCGA AGCCCGACAC GCTCGCCGTC
GATCGCGCCG ACTACACGCT GACGATCGCC GCGCAGGCGT GCGTGTCGCT GTATCTGACG
GTCGAGGCGC GCGTGGGCGC CGCGCACGCG GGCGGCGACG CGTTCGCGCG GCGGCCGTGC
GTCGCGACCG GGCGCGGCGC GCTGCGCAAG GCGCTGGCCG ACGTGCACCG CGCGATGCGC
GAGCGGCGCC GCACGATCGC GCGCGTGCAC ACGAGCAATC CGCTTTTCAA CGCGTGGCTC
GACCGCTCGC TCGCGGACCT GGGCCTGCTC ACGACGTCGC TCGAAACCGG CCCGTACCCG
TACGCGGGCA TTCCGTGGTT CTCGACGCCG TTCGGCCGCG ACGCGGTGAT CACGTCGCTG
CAGATGCTGT GGCTGCAGCC GTCGCTCGCG CGCGGCGTGC TGCGCTTTCT CGCCGAGCAT
CAGGCGCGCG AGACATCGGC GTTTCGCGAC GCGGAGCCGG GCAAGATCAT GCACGAATTC
CGCAAGAGCG AGATGGCGGC CACGGGCGAA GTGCCGTTCG CGCTGTACTA CGGCGGCGTC
GATACCACGC CGTTGTTCGT CGTGCTCGCG GGCGCGTATC TCGAGCACAC CGGCGACGAA
TCGCTGATCG ACGAGCTGTG GCCCGCGCTC GAGCGTGCCG CGCAGTGGGT GAGCACCGTG
TGCGAGCGCA ACCCGCGCGG GCTGCTCGAC TATCAGCGCA CCTCCGCGCG CGGGCTCGCC
AACCAGGGCT GGAAGGACAG CCAGGATTCG GTGTTCCACG CGGACGGCCG CTTCCCGAGC
GGGCCGATCG CGCTCGTCGA AGTGCAGGCC TACGCGTGCG CGGCGTTCGA CGCGATGGCG
ACGTTCTCGC GCCGGCGCGG CCACGCGGCC GACACCGTGC GCTACGCGCA GCGCGCGAAG
CGGCTGCGCG AGCAGGTCGA GGCGTTGTTC TGGATGCCCG AGGCGGGCTT CTACGGCATC
GCGGTGGACG GCCACGGCGA GCTGTGCCGC GTGCTCGCGT CGAACGCCGC GCACCTGCTC
GCGTTCGGCC TGCCCGAGCA GAGCCGCGGC GAATCGGTCG CGCGCGTGCT CGGCTCGACG
CTGTTTCGCA CCGGCTGGGG CGTGCGCACG CTCGCGGCCG GCCAGCCGCG CTTCAATCCG
ATGGCGTATC ACAACGGCTC GATCTGGCCG CACGACAACG CGCTCGCCGC GCGCGGCCTC
GCGCGCTACG GCGACAAGCG CGCGGTGCTC GATCTGTTGC GCGCGCTGTT CGAGGCGGCC
GTGAGCTTCG ACATGCGGCT GCCCGAGCTC TTCTGCGGCT TCCCGCGCCG GCGCGGCGAG
CCGCCAACGG CGTATCCGGT CGCGTGCCTG CCGCAGGCGT GGGCGGCGGG CGCGCCGTTC
ATGATGCTGC AGGCTTGCCT CGGCATCTCG GTCGACGCGG CGCGCGGCGA GGTGCGCGTC
GAGCGGCCCG AGCTGCCGGA AGGCGTCGAT TGGCTGCGCG TCGACGATCT GCGCGTCGGC
GGCGACAGCG TGTCGCTCAC GTTCCGGCGC GTCGAGGGGC AAGTGGTCGC GGCGGCCGAG
CCGGGCGGCG CGCGCGTCGT CGCGGTGCTG TAA
 
Protein sequence
MPRQADPASP RAPQAAAPAS SSARCAALGA APPQSAQPPQ SPQPAPSTPA FIAPEPDAQK 
AVRGSQFVLK AGDAFVVSDA LGDIAGRDDG LFVDDMRVLS QWRLTFGGRA PSLLSGATSA
DNASFTAHLT NRPLPPLGGR ETPEGVIHIE RMRVLADNVL HEALTLTNYG TCDAEVPLSV
SFGADFKDMF EVRGSRRERR GAVAPPCVEA GAVRLRYDGL DAVERSVRIG FEPKPDTLAV
DRADYTLTIA AQACVSLYLT VEARVGAAHA GGDAFARRPC VATGRGALRK ALADVHRAMR
ERRRTIARVH TSNPLFNAWL DRSLADLGLL TTSLETGPYP YAGIPWFSTP FGRDAVITSL
QMLWLQPSLA RGVLRFLAEH QARETSAFRD AEPGKIMHEF RKSEMAATGE VPFALYYGGV
DTTPLFVVLA GAYLEHTGDE SLIDELWPAL ERAAQWVSTV CERNPRGLLD YQRTSARGLA
NQGWKDSQDS VFHADGRFPS GPIALVEVQA YACAAFDAMA TFSRRRGHAA DTVRYAQRAK
RLREQVEALF WMPEAGFYGI AVDGHGELCR VLASNAAHLL AFGLPEQSRG ESVARVLGST
LFRTGWGVRT LAAGQPRFNP MAYHNGSIWP HDNALAARGL ARYGDKRAVL DLLRALFEAA
VSFDMRLPEL FCGFPRRRGE PPTAYPVACL PQAWAAGAPF MMLQACLGIS VDAARGEVRV
ERPELPEGVD WLRVDDLRVG GDSVSLTFRR VEGQVVAAAE PGGARVVAVL