| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2193 |
|---|
| Symbol | |
|---|
| ID | 3693520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 2681103 |
|---|
| End bp | 2683865 |
|---|
| Gene Length | 2763 bp |
|---|
| Protein Length | 920 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637732447 |
|---|
| Product | patatin-like phospholipase |
|---|
| Protein accession | YP_337344 |
|---|
| Protein GI | 228969325 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.193867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGC TCGCCTCTTC CGCCCGTGCG GGCTTTCGCG TTCCCGGCTT CGTGGCCGCC
CTGCTGTTCG TCTGCGCCGC GACGGGACGG CCCGCACCCG CCACCGCGGC CGATACCGCA
ACCGTGGCGT CCGCCGCGAC CGCCGCCGCA AGCGCCGCGG GTGCGCCGGC TTCGACAACG
CTCCCGCCCG CCGCAACGCC GACGCGCGTC GCCTCGTCGG CCGTGGCCGC TTCGTCCTCC
GCCTCGTCCC CCGCCTCGTC CTCCGCTTCG GCCGCCACGC CCGCGAACGC TGCGGCCGCG
TGGTCGTGGA CCGCCGCCCG GCGCGCCGAC GCGCCGGATT CGAGCTCCGT CTCGAATGCC
GTCTCGAATA GCGGATCGAA CGTCGCCGGG ACCGCCGCCG CCCACGGCCC CCACGCCCCT
CACACCGCGC CCGACGCGAG CGCGCCCTCG GCGCCGACGC CCCCCACCGC CGCCACGCCG
GCCGCCGCAG GCGCCTCGGC GTCCACGGCA GCCGCGCCGA CGCCGGCCGC GACGAACACC
CTCGTTTGCA TGCCGGACGG CGGCGGCCCG CACCGGCCGG CGATCGGCCT CGTGCTGTCG
GGCGGCGGCG CGCGGGGCTA CGCGCATCTG GGCGTGCTGA AGGTGCTGGA AGCGAACCGG
ATTCCGGTCG ACTGCATCGC CGCGACGAGC ATGGGCGCGG TCGTCGGCGG CCTGTACGCG
ACCGGCATGA CCGCGCAGGA CATGCAGCGG CGGCTGTCGC AGGTGAACCT CGCCGACATC
GCGTTCGACG TAACCGAGCG CTCGGACCTG CCGCAGAAGA AGCGCGAGGA CGAACGCCTC
TATATCGACA GCCTGACGAT CGGCTTCGAT TCGAAGGGCT TCAAGGCGCC CGTCGGGCTC
GTGCAGGGCA ACCGGCTGCA GGCGCTCCTC GCGAACTGGA CCGCCGCCGT GCCGACGAAC
CAGCCGTTCG ACCGGCTGCC GATCCCGTTC CGAGCGATCG CGACCGATCT GCAGACCGGC
CAGAAGGTGG TGCTCGATCA CGGCTCGCTG CCGCTCGCGA TCCGCGCGAG CATGGCGCTG
CCGGGCCTGT TCTCGCCCGC CGAGATCGAC GGCCGCGCGC TCGTGGACGG CGGGCTCGTC
GGCAACCTGC CCGTCGACGC CGCGCGCGCG ATGGGCGCGG ACGTCGTGAT CGCGGTCGAC
ATCGGCTCGC CGCTGCGCCC GCTGGACGCG CTAGCGTCGC CCGCCGACGT GATGCAGCAG
ATGATCGGCA TCCTGATCCG GCAGAACGTC GCCGAGCAGC GCAAGCAACT GACGGCGAAC
GACATCCTGC TGCAGCCGGA CCTCGGCAAG CAGACGTTCA CCGATTTTCA GAACGCGAAC
CAGGCGATCG CCGCGGGCGA GGCCGCCGCC GTCGCCGCGC TGCCGCGGCT CGCGCGCTAC
GCGCTGTCGC CCGAGCAATA CGAAGCGTAT CGGGCCGCCC ACGCGCGCCC GCAGCAGCCG
ATTCGCATCA CGTCGATCGA GATCCGCACC AACGGCGCGT CGGTGCCCAA GCAGATCGTG
CGCAACGCGC TGCGCGTGAA GCCGGGCGAC GTCTACGATC CGCAGGCGGT CAGCGCCGAT
CTGCTGTCGC TCACGACGAG CGGCAATTTC GAGAACGTCA CGCAGCAGAT CATCAACGAA
GGCGACGAGC ACCGGCTCGT GATCGACGCG CAGGAGAAAT ACTGGGGGCC GAACTTCCTG
CTGTTCGGGC TGGGGATGTC GAGCAGTTCC ACCGACGAAG GCGGCTTCCG GCTGCATCTG
GGCTACCGGC GGCCCTGGCT CACGCCGTCC GGCCTCGAAT TCCGCGCGGA TACGACGCTC
GGCAGCGACA TGCAGTCGGT GCACGTCGAG TTGCGCCAGC CGCTGTCGAA CAAGACCGGC
TACTACGTCG CGCCGTACGC GGACTACAAG CGGCGGTTCA CAAACCTCTA CGACAGCGAC
ACGGACATCA AAATCACGCA ATACCGCTTC CAGACGAGCC GCGTCGGCCT CGATTTCGGG
CTGCCGCTCG CGCGGCTCGG CGATTTCCGC ATCGGGCTCG CCTATACGCA CCTCACGGCG
TCGCCCACGT ATAACGTGCC GCTCAATTGG TTCCTTCCCG ACGACGCGCC ATCGCCCGGC
ACGCTGTTCC CGTCCGCCTA CGGACACCAG ATAAGCGCGC GCGCCCGGCT TGTCATCGAT
CAGCTCGACG ATCCGACTTT CCCGCGCAAG GGGTACTTCG TCGAAGCGCG CGTCGAACGT
TCGCTGTCGA AGAGCAACGA TACGTTCTTC GACAGCGACG CTTCGTTCAC CGACGTCTAC
GGGAGGCTGA TGGTCGCGCA ACGGTTCGGC AGGCATAGCG TGAACATAAG CGTCGAGGCA
GGCAAGAGCT TCGGCGGCAC GAACTTCGGC AACCCGCTCG GCTATACGCT CGGCGGTTTC
CAGCATCTGT CCGCATATGC AGCCGATCAA TTGAGCGGCA ACGCGCTGCT CTACGGGCAG
GTCACGTACA TGAACCAACT GGCGACGTTC AATGCGTCTC CGATCAAGGC GCTTTACGTG
GGCGCGAGCG CGGAAGTCGG CAACGTCTGG ACGCCCGACA CGCGTATCGG CAGCGGATCG
CTCAAACAAA GCTACACGTT CTTCACCAGC CTCACGACTG CGTTCGGGCC GGTATACTTC
GGCGTTGCGC TCGCGCCGGG AGGCCGACGC AACATCTACT TCCAGTTGGG CCGCACGTAC
TGA
|
|---|
| Protein sequence | MTVLASSARA GFRVPGFVAA LLFVCAATGR PAPATAADTA TVASAATAAA SAAGAPASTT
LPPAATPTRV ASSAVAASSS ASSPASSSAS AATPANAAAA WSWTAARRAD APDSSSVSNA
VSNSGSNVAG TAAAHGPHAP HTAPDASAPS APTPPTAATP AAAGASASTA AAPTPAATNT
LVCMPDGGGP HRPAIGLVLS GGGARGYAHL GVLKVLEANR IPVDCIAATS MGAVVGGLYA
TGMTAQDMQR RLSQVNLADI AFDVTERSDL PQKKREDERL YIDSLTIGFD SKGFKAPVGL
VQGNRLQALL ANWTAAVPTN QPFDRLPIPF RAIATDLQTG QKVVLDHGSL PLAIRASMAL
PGLFSPAEID GRALVDGGLV GNLPVDAARA MGADVVIAVD IGSPLRPLDA LASPADVMQQ
MIGILIRQNV AEQRKQLTAN DILLQPDLGK QTFTDFQNAN QAIAAGEAAA VAALPRLARY
ALSPEQYEAY RAAHARPQQP IRITSIEIRT NGASVPKQIV RNALRVKPGD VYDPQAVSAD
LLSLTTSGNF ENVTQQIINE GDEHRLVIDA QEKYWGPNFL LFGLGMSSSS TDEGGFRLHL
GYRRPWLTPS GLEFRADTTL GSDMQSVHVE LRQPLSNKTG YYVAPYADYK RRFTNLYDSD
TDIKITQYRF QTSRVGLDFG LPLARLGDFR IGLAYTHLTA SPTYNVPLNW FLPDDAPSPG
TLFPSAYGHQ ISARARLVID QLDDPTFPRK GYFVEARVER SLSKSNDTFF DSDASFTDVY
GRLMVAQRFG RHSVNISVEA GKSFGGTNFG NPLGYTLGGF QHLSAYAADQ LSGNALLYGQ
VTYMNQLATF NASPIKALYV GASAEVGNVW TPDTRIGSGS LKQSYTFFTS LTTAFGPVYF
GVALAPGGRR NIYFQLGRTY
|
|---|
| |