Gene BURPS1710b_A2180 details

Gene Information

• Locus tag: BURPS1710b_A2180
• Symbol: mmsA
• ID: 3693115
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 2662847
• End bp: 2666206
• Gene Length: 3360 bp
• Protein Length: 1119 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637732433
• Product: methylmalonate-semialdehyde dehydrogenase
• Protein accession: YP_337330
• Protein GI: 76817249
• COG category: [C] Energy production and conversion
• COG ID: [COG1012] NAD-dependent aldehyde dehydrogenases
• TIGRFAM ID: [TIGR01722] methylmalonic acid semialdehyde dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCATGGGA TCGGAGTAAG CGCTGAAGCG CTAACTCCGA TCGACAGGAG ACGACACGAT 
GACGGCACAG GCGTTCCTCG ACGCACGCGA TTTTCTGCTG CGCCACCGCA CCGACTACGA 
CACCGCCTAT CGCGATTTCA GATGGCCGGC GCTCGACGAA TTCAACTGGG CGCTCGACTA 
TTTCGACGCG ATCGCGCGCG GCAACGACAA GCCCGCACTA TGGATCGTCG ACGCGGCGTC 
GGGCGACGGC GCGCGGTACT CGTTCGCGCA GATGTCGGAG CGCTCCGCAC GGATCGCGAA 
CTGGCTGCGC GAAATCGGTG TCGCACGCGG CGAGCGGATT CTGCTGATGC TGCCGAATCG 
GGTCGAGCTG TGGGACACGA TGCTCGCGGC GATGAAGCTG GGCGCGGTCG TGCTGCCCGC 
GACGACGCAA CTGTCCGCCG ACGACGTGCG CGAGCGCGTG CAGATCGGCG GCGCGCGCTA 
TGCGATCGTC GACGAGCACG AAGCCGAGAA GTTCGAGCAG CCGGGGCTCG ACGTGACGAA 
GATCGTCGCG GGCGCGCCGC GCGCCGGATG GCTCGCGCTC GCCGACGGCT ATCGCGCGCC 
GGCCGAGTTC GCGCCCGACG CGCGCACGCG CGCGAGCGAC CCGATGCTGC TGTACTTCAC 
GTCGGGCACC ACATCGAAGC CGAAGCTCGT CGAGCACACG CACCGCACGT ACCCGGTCGG 
CAGCCTGTCG ACGATGTACT GGGTCGGCCT GCAGCCCGGC GACATCCACT GGAACATCAG 
CTCGCCCGGC TGGGCGAAGC ACGCGTGGAG CTGCTTCTAC GCGCCGTGGA ACGCGCAGGC 
GTGCGTGTTC GCGTTCAACT ACGCCCGCTT CGAGCCGAAG GTGGTGCTCG ATGCGCTCGT 
CAAGTACCAG GTGACGACGA TGTGCGCGCC GCCGACCGTC TGGCGAATGC TCGTGCAGCA 
GCCGCTTTCG ACGTTCGCCG TGAAGCTGCG CGAGATCGTC GGCGCGGGCG AGCCGCTCAA 
CCCCGAGATC ATCGAGCGCG TGAGAAAGGC ATGGGGCGTG ACGATTCGCG ACGGCTACGG 
GCAGACCGAG ACGACCTGCC TGATCGGCAA TTCGCCGGGC CAGCCGGTCG TGCCGGGCTC 
GATGGGCCGG CCGCTGCCGG GCTATGCGAT CGCGCTGCTC GATCCCGACG GCGCGCACGC 
GAGCGAAGGC GAGATCGCGC TGCCGGTCGG CCCGGATGTC GAGCGCCCGG TCGGCCTGAT 
GAAGGGCTAC GCGAGCAATC CGGAGGCGAC CGCGCACGCG ATGCGCGACG GCCATTACCG 
GACGTCCGAC ATCGCGCTGC GCCGCGACGA CGGCTATTTC GTCTACGTCG GCCGCGCGGA 
CGACGTGTTC AAGTCGTCCG ACTACCGGCT GAGCCCGTTC GAGCTCGAGA GCGTGCTGAT 
CGAGCACGAG GCGATCGCCG AGGCGGCCGT CGTGCCGAGC CCGGACCCGG TGCGGCTGTC 
GGTGCCGAAG ACCTTCGTCA TGCTGCGCGC GGGCTACGAG CCGAGCGAGA CGCTCGCGCG 
CGAGATCTTC CGCTTCTCGC GCGAGAAGCT CGCGCCGTAC AAGCGGATTC GGCGGTTGCA 
GTTCGCCGAG CTGCCGAAGA CGATCTCCGG CAAGATCCGC CGCGTCGAGC TGCGCCGCCG 
CGAGCTGGAG CGCGGCGACG ACGCGTCGAG CCGGATGCCC GGCGAATACT GGGAAGAGGA 
TTTCGCGGCC GACGGCAAGT GACGCCGGCG TGCCGCTTCG CATCAACCGG CCGGCGGCGC 
GCCGCCGGCC ATAGCCAGGA GAATCTCACG ATGAACGCAA CTCCGTCGTC CCGGAAGGGA 
CATCACGTGC CGACCGTGAA ACTGTTGATC GCCGGCGAAT TCGTCGAATC CCATGCGACC 
GAGTGGCGCG ACATCGTCAA CCCGGCGACT CAGGAACTGC TCGCACGCGT GCCGTTCTCG 
ACCGTGGCCG AAGTCGGCGC GGCCGTCGAG GCCGCGCATG CCGCGTTCGC GAAATGGAAG 
AGCACGCCGA TCTCCGCGCG CATGCGCATC ATGCTGAAGT TCCAGGATCT CGTGCGCGCG 
AACCTGCCGC AGATCGCGAA GACGCTGACG GCCGAGCAGG GCAAGACGCT GCCCGACGCC 
GAAGGCGACG TGTTCCGCGG CCTCGAGGTG GTCGAGCACG CGTGCTCGGT CGGCACGCTG 
CAACTGGGCG AGTTCGCGGA GAACGTCGCG GGCGGCGTCG ATACGTACAC GCTGCGCCAG 
CCGCTCGGCG TGTGCGTCGG CATCACGCCG TTCAACTTCC CCGCGATGAT CCCGCTATGG 
ATGTTCCCGA TGGCGATCGT CTGCGGCAAC ACGTTCGTGC TGAAGCCGTC CGAGCAGGAT 
CCGCTGTCGA CGATGCAGCT CGTCGAGCTC GCGATCGAGG CGGGCGTGCC GAAGGGCGTG 
CTCAACGTCG TGCACGGCGG CAAGGAAGTC GTCGACGCGC TGTGCTCGCA TCCGCTCGTG 
AAGGCGATTT CGTTCGTCGG CTCGACGGCC GTCGGCACGC ACGTGTACCG GCTCGGCAGC 
GAGCACGGCA AGCGCGTGCA ATCGATGATG GGCGCGAAGA ACCATGCGGT GATCCTGCCC 
GATGCGAACC GCGAGCAGAC GGTGAACGCG CTCGTCGGCG CGGCGTTCGG CGCGGCGGGC 
CAGCGCTGCA TGGCGACTTC GGTCGCGGTG CTCGTCGGCG CGGCGCGCGA CTGGCTGCCC 
GACATCGTCG CGAAAGCGAA GACGCTGAAG GTCAACGCGG GCGCGGAAGC GGGCACCGAC 
GTCGGCCCCC TGGTGTCGCG CGCGGCGAAG CAGCGGGTGC TCGGCCTCAT CGAGACCGGC 
GAACAGGAAG GCGCGAGGCT CGTGCTCGAC GGCCGCGGCG TGAGCGTGCC CGGCTATGAG 
CACGGCAATT TCGTCGGCCC GACGATCTTC GCGGACGTGA GGCCGGAGAT GTCGGTCTAC 
ACGCATGAAA TCTTCGGCCC GGTGCTGTGC GTGATGTCGG TCGACACGCT CGACGAGGCG 
ATCGCGCTCG TCAACGCGAA TCCGTTCGGC AACGGCGTCG GCCTGTTCAC GCAGAGCGGC 
GCGGCCGCGC GCAAGTTCCA GAGCGAGATC GACATCGGCC AGGTCGGCAT CAACATTCCG 
ATTCCGGTGC CGGTGCCGTT CTTCAGCTTC ACGGGCTCGC GCGGCTCGAA GCTCGGCGAT 
CTCGGCCCGT ACGGCAAGCA GGTCGTGCAG TTCTACACGC AGACGAAGAC CGTCACCGCG 
CGCTGGTTCG ACGACGATGC GACGGCGGGC GCCGTCAACA CGACGATTCG CCTGCACTGA 

 

Protein sequence

MHGIGVSAEA LTPIDRRRHD DGTGVPRRTR FSAAPPHRLR HRLSRFQMAG ARRIQLGARL 
FRRDRARQRQ ARTMDRRRGV GRRRAVLVRA DVGALRTDRE LAARNRCRTR RADSADAAES 
GRAVGHDARG DEAGRGRAAR DDATVRRRRA RARADRRRAL CDRRRARSRE VRAAGARRDE 
DRRGRAARRM ARARRRLSRA GRVRARRAHA RERPDAAVLH VGHHIEAEAR RAHAPHVPGR 
QPVDDVLGRP AARRHPLEHQ LARLGEARVE LLLRAVERAG VRVRVQLRPL RAEGGARCAR 
QVPGDDDVRA ADRLANARAA AAFDVRREAA RDRRRGRAAQ PRDHRAREKG MGRDDSRRLR 
ADRDDLPDRQ FAGPAGRAGL DGPAAAGLCD RAARSRRRAR ERRRDRAAGR PGCRAPGRPD 
EGLREQSGGD RARDARRPLP DVRHRAAPRR RLFRLRRPRG RRVQVVRLPA EPVRARERAD 
RARGDRRGGR RAEPGPGAAV GAEDLRHAAR GLRAERDARA RDLPLLAREA RAVQADSAVA 
VRRAAEDDLR QDPPRRAAPP RAGARRRRVE PDARRILGRG FRGRRQVTPA CRFASTGRRR 
AAGHSQENLT MNATPSSRKG HHVPTVKLLI AGEFVESHAT EWRDIVNPAT QELLARVPFS 
TVAEVGAAVE AAHAAFAKWK STPISARMRI MLKFQDLVRA NLPQIAKTLT AEQGKTLPDA 
EGDVFRGLEV VEHACSVGTL QLGEFAENVA GGVDTYTLRQ PLGVCVGITP FNFPAMIPLW 
MFPMAIVCGN TFVLKPSEQD PLSTMQLVEL AIEAGVPKGV LNVVHGGKEV VDALCSHPLV 
KAISFVGSTA VGTHVYRLGS EHGKRVQSMM GAKNHAVILP DANREQTVNA LVGAAFGAAG 
QRCMATSVAV LVGAARDWLP DIVAKAKTLK VNAGAEAGTD VGPLVSRAAK QRVLGLIETG 
EQEGARLVLD GRGVSVPGYE HGNFVGPTIF ADVRPEMSVY THEIFGPVLC VMSVDTLDEA 
IALVNANPFG NGVGLFTQSG AAARKFQSEI DIGQVGINIP IPVPVPFFSF TGSRGSKLGD 
LGPYGKQVVQ FYTQTKTVTA RWFDDDATAG AVNTTIRLH