| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2172 |
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| Symbol | fom2 |
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| ID | 3694093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 2651136 |
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| End bp | 2653301 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637732426 |
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| Product | thiamine pyrophosphate enzyme family protein |
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| Protein accession | YP_337323 |
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| Protein GI | 76817404 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.531587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTCTTT CGATAGGAGT AAATCGTGCC AATAAGAGAA TTAATAAGCG CGCCGATTAC
CAACGAACAA AGACGCCGAT CGTTCAAGGA AAAGCTGGCA ACCGGGCGCG CGCTGCGCTT
CATCGAAAGC CACAGCCCGA TTTCCGCAAT GATCAGCGAA AAGGTTTATG TTGCGCACGG
AGCGTCTCAA TCCGAGTTCG ACGGCTTCTG GTCGAGTTCA CTGACCGACT CGACGCTGCG
CGGCCGGCCG GACATCGAAA TCCTGGATAT CGCGAGCAGG CTCGCCAATG TCCAGCATAT
TTTCGACGTG ACGACGAAGC CGCTCATCAT CGACGGCGAC ACGGGCGGCA AGCCCGAGCA
TTTCGCGCTG AACGTGCAGT CGCTCGAGCG ATCCGGCGTC TCGGCGGTGA TCATCGAGGA
CAAAACGGGG TTGAAGAAAA ATTCGCTGCT CGGCAACGAC GTGATTCAGC ACCAGGAATC
GATCGAGGAT TTCTGCGAAA AGATTCGCGT CGGCAAGGCC GCGCAGATCA CCGACGATTT
TCAGATCATC GCCCGCGTCG AGAGCTTGAT TCTCGACAAG GGCATGCCGG ACGCGCTCGC
GCGCGCGGCC GCGTATTGCG AGGCCGGCGC CGACGGCGTG ATGATCCACA GCCGCAAGAA
GGACGCGGAC GAAGTGATCG AATTCGCGCA GCGGTTCCGC GCATGCCGCC GCGACGCGTA
TCTCGTGTGC GTGCCGACGA GCTTCAACGC GATTTCGTTC AGCGAGCTCG CGCGCCACTT
CAGCGTCGTG ATCTACGCGA ATCACCTGCT GCGCGCCGCG TATCCGGCGA TGCTCGCGGT
CGCCGAGGGC ATTCTCGCGC ACGGCCGCAC GCTCGAGATC GAAGAACGCT GCCTGCCCGT
CAACGAGATC CTGAAGCTCA TTCCGGGAAC CGCGTGACCA TGAAAACGGA AGACCTGATC
GGCATACTGA CCGATGCCGG CGTCGATCTC GCGGTCGGCG TTCCAGATTC CTTACTGAAA
TCGTTCTGCG GCCGGCTGAA CGATCCGGAT TGCCCGCTGC GCCACCTCGT CGCGAGCAGC
GAGGGCGGCG CGGTCGGCAT CGCGATCGGC CACCATCTCG CAACGGGCGG CCTCGCGGCC
GTCTACATGC AGAACTCCGG CATCGGCAAC GCGATCAACC CGCTCGTGTC GCTCGCCGAT
CGCGCGGTCT ATGGGATTCC GCTCGTGCTG ATCGTCGGCT GGCGCGCGGA AATCTCGGTA
AGCGGCGCAC AGGTACACGA CGAGCCGCAG CACGTGACGC AAGGCCGCAT CACGCTGCCG
CTGCTCGACG CGCTGTCGAT CCGCCACCTC GTGCTCGAGC GCGCCGGCGG CGAAAACGAC
GCGCTCGCGC CGTCGATCGC GCAATTGATC GCCAGCGCGC GCCAAACGTC GCAGCCCGTC
GCGCTCGTCG TGCGCAAGGA CGCGTTCGAC GACGCGAGCG CCTCGCAGCC GGGCGCGGCC
GCCCCGCACG CCGGCCGGAT GACCCGCGAG CAGGCCATCG CGCTGATCGT CGAGCACGCG
GACGCAGGCG CGGCGATCGT CTCGACGACG GGCGTCGCCT CGCGCGAGCT GTACGAGCTG
CGCGATCGGC TCGGCCACTC GCACGCGCGC GATTTCCTGA CGGTCGGCGG CATGGGGCAC
GCGTCGCAGA TCGCGGTCGG CATCGCGCTC GCCCGCCCCG CGCAAAAGGT GATCTGCATC
GACGGCGACG GCGCGCTGCT GATGCACATG GGCGGCCTCG CGTACTGCGC GGGCGCGCCG
AACCTCACGC ACGTCGTCAT CAACAACGGC GTCCACGATT CGGTCGGCGG GCAACCCACG
CTCGCCGCGC ACCTGCGGCT GTCGCACATC GCGGCGTCGT GCGGCTACGC GTTCAGCCGC
AGCGTCGCGA CGCCCATCGA GCTCGAGAGC GCGCTGCATC ACGCGAGCCG CCTCGACGGC
AGCGCATTCA TCGAAGTGAC GTGCCGCCCC GGCTATCGCA GCGATCTCGG CCGGCCGCGC
ACGTCGCCCG CCGAGAACAA ACGCCATTTC ATGGCCTTCC TATCCCGCAA CGGAGCGACA
CATGAGCGAG ACGATCACGC GCAGGAAAGT GGCATACAAG ACGCTATCCA ATGCGCTCGG
CACTGA
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| Protein sequence | MLLSIGVNRA NKRINKRADY QRTKTPIVQG KAGNRARAAL HRKPQPDFRN DQRKGLCCAR
SVSIRVRRLL VEFTDRLDAA RPAGHRNPGY REQARQCPAY FRRDDEAAHH RRRHGRQARA
FRAERAVARA IRRLGGDHRG QNGVEEKFAA RQRRDSAPGI DRGFLRKDSR RQGRADHRRF
SDHRPRRELD SRQGHAGRAR ARGRVLRGRR RRRDDPQPQE GRGRSDRIRA AVPRMPPRRV
SRVRADELQR DFVQRARAPL QRRDLRESPA ARRVSGDARG RRGHSRARPH ARDRRTLPAR
QRDPEAHSGN RVTMKTEDLI GILTDAGVDL AVGVPDSLLK SFCGRLNDPD CPLRHLVASS
EGGAVGIAIG HHLATGGLAA VYMQNSGIGN AINPLVSLAD RAVYGIPLVL IVGWRAEISV
SGAQVHDEPQ HVTQGRITLP LLDALSIRHL VLERAGGEND ALAPSIAQLI ASARQTSQPV
ALVVRKDAFD DASASQPGAA APHAGRMTRE QAIALIVEHA DAGAAIVSTT GVASRELYEL
RDRLGHSHAR DFLTVGGMGH ASQIAVGIAL ARPAQKVICI DGDGALLMHM GGLAYCAGAP
NLTHVVINNG VHDSVGGQPT LAAHLRLSHI AASCGYAFSR SVATPIELES ALHHASRLDG
SAFIEVTCRP GYRSDLGRPR TSPAENKRHF MAFLSRNGAT HERDDHAQES GIQDAIQCAR
H
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