| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2123 |
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| Symbol | omp38 |
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| ID | 3693580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2586961 |
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| End bp | 2588103 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637732377 |
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| Product | outer membrane porin |
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| Protein accession | YP_337274 |
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| Protein GI | 76818477 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT CGAATGTTGC CGTGATGGGC GCGCTTGCGC TCGCCATCGG AATCGCGCCG
GGCGCAAGCC GCGCGCAGAG CAGCGTCACG CTTTACGGGA TTCTCGATGC CGGTATCACG
TACGTCAGCA ATACCGGCGG TTCGCACGTC TTCAAGTTCG ACGACGGCGT GTCGTACGGC
AACCGGATCG GCTTCAAGGG CACCGAGGAT CTCGGCGGGG GCCTGAAGGC GGTCTTCGTG
CTCGAGAGCG GCTTTCGCCT GGGCAACGGC CAGCTCGGTT TCGGCGGCGC GCAGTTCGGC
CGCCAGGCTT ACGTCGGATT GCAGAACAAC TGGGGGACGC TGTCGTTCGG CAATCAGCTC
GACATGACCG AGGAGATGGT CTATCTGAAC AACATCTCCG CATGGGCGAG CGGCTATGCG
ATCCACCAGG GCGACTTCGA CCGCTTCAAC GGCGATCGCC TGCCGAACTC GGTGAAGTTC
CTGTCGAACG ACTTCAGCGG CTTGAAGTTC GGCGCGATGT ATTCGTTCGG CAACGTCGCG
GGCGACTTCC ACCGCAACAG CGCGTGGAGC GCGGGCGCGA ACTACACGCA CGGCGATCTG
TCGGTGGGCG CGGCCTATAC GCACCTGAAC AATCCGTCCG GCATCTATGC GTTCGATCCG
TACGCGATGA TCGGCACGCG GACCTTCCTC GGCCAGCCGA CGGTCAGCGT CGATCCGGCG
ACGGGCAAGG TCACCGATCT GTTCGCGAAT ACGCCGATGA ACGTCGACAG CCAGGGCACC
TTCGGCGTCG GCGCGAGCTA CACGATCGAC AAGCTGACGC TGTCGGGCAA TTTCACGTAC
TCGACGATCA AGGGCTTCGG CAACACGTCG CACATGCAGG TCTACGAAGG CGGCGGGCTG
TATCAGTTCA CGCCGGCGCT GAGCTTCGTC GCGGGCTACC AGCACACGCG CTTCGAAGGC
CATCACTGGA ATCAGGGGTC GGCGGGCGTT CACTACCTGC TGTCGAAGCG CACGGACGTC
TATCTTTCCG GCGACTACCT GCGTGCGTCG AACGGTGTCG ACGCGGTGAT CGGCTACAGC
TTCACGCCGT CCACCACGCA AACGCAGGCG GACATTCGCA TCGGGATGCG CCACTCGTTC
TGA
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| Protein sequence | MKKSNVAVMG ALALAIGIAP GASRAQSSVT LYGILDAGIT YVSNTGGSHV FKFDDGVSYG
NRIGFKGTED LGGGLKAVFV LESGFRLGNG QLGFGGAQFG RQAYVGLQNN WGTLSFGNQL
DMTEEMVYLN NISAWASGYA IHQGDFDRFN GDRLPNSVKF LSNDFSGLKF GAMYSFGNVA
GDFHRNSAWS AGANYTHGDL SVGAAYTHLN NPSGIYAFDP YAMIGTRTFL GQPTVSVDPA
TGKVTDLFAN TPMNVDSQGT FGVGASYTID KLTLSGNFTY STIKGFGNTS HMQVYEGGGL
YQFTPALSFV AGYQHTRFEG HHWNQGSAGV HYLLSKRTDV YLSGDYLRAS NGVDAVIGYS
FTPSTTQTQA DIRIGMRHSF
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