Gene BURPS1710b_A2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A2106 
SymbolglyA 
ID3693739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2567724 
End bp2568998 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content68% 
IMG OID637732361 
Productserine hydroxymethyltransferase 
Protein accessionYP_337258 
Protein GI76817352 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAACG CCAATCCCTT CTTCTCGCAA TCGCTCGCCG AGCGCGACGC GTCCGTGCGC 
GGCGCGATCC TCAAGGAACT CGAACGCCAG CAGTCGCAAG TCGAGCTGAT CGCGTCGGAG
AACATCGTGT CGCGCGCGGT GCTCGATGCG CAGGGCTCGG TGCTGACCAA CAAGTATGCG
GAAGGCTATC CGGGCAAGCG CTATTACGGC GGTTGCGAAT TCGCCGACGA AGTCGAGGCG
CTCGCGATCG AGCGCGTGAA GCGGCTCTTC AACGCCGGCC ATGCGAACGT GCAGCCGCAC
TCGGGCGCCC AGGCGAACGG CGCGGTGATG CTCGCGCTCG CGAAGCCGGG CGACACGGTG
CTCGGAATGT CGCTCGACGC GGGCGGACAC CTCACGCACG GCGCGAAGCC GGCGCTGTCC
GGCAAGTGGT TCAACGCGCT CCAGTACGGC GTGAGCCGCG ACACGATGCT GATCGATTAC
GACCAGGTCG AGGCGCTCGC GCAGCAGCAC AAGCCGAGCC TCATCATCGC CGGCTTCTCC
GCCTATCCGC GCAAGCTCGA CTTCGCGCGG TTTCGCGCGA TCGCCGATTC GGTCGGCGCG
AAGCTGATGG TCGACATGGC GCATATCGCC GGCGTGATCG CCGCGGGCCG CCATGCGAAC
CCGGTCGAAC ACGCGCACGT CGTCACGTCG ACGACGCACA AGACGCTGCG CGGCCCGCGC
GGCGGCTTCG TGCTGACCAA CGACGAGGAG ATCGCGAAGA AGATCAACTC GGCGGTGTTC
CCCGGCCTGC AGGGCGGCCC GCTGATGCAC GTGATCGCCG GCAAGGCGGT GGCGTTCGGC
GAGGCGCTGA CAGACGATTT CAAGACCTAC ATCGATCGCG TGCTCGCGAA CGCGCAGGCG
CTCGGCGACG TGCTGAAGGC GGGCGGCGTC GATCTCGTGA CGGGCGGCAC CGACAACCAT
CTGCTGCTCG TCGATCTGCG CCCGAAGGGC CTGAAGGGCG CGCAGGTCGA GCAGGCGCTC
GAGCGCGCGG GCATCACGTG CAACAAGAAC GGCATTCCGT TCGATCCGGA GAAGCCGACG
ATCACGTCGG GCATCCGCCT CGGCACGCCG GCGGGCACGA CGCGCGGCTT CGGCGCAGCG
GAGTTCCGCG AGGTCGGCCG GCTGATTCTC GAGGTGTTCG AGGCCCTGCG CACGAACCCG
GAAGGCGATC ACGCGACCGA ACAGCGCGTG CGGCGCGAGA TCTTCGCGCT TTGCGAACGC
TTCCCGATCT ACTGA
 
Protein sequence
MSNANPFFSQ SLAERDASVR GAILKELERQ QSQVELIASE NIVSRAVLDA QGSVLTNKYA 
EGYPGKRYYG GCEFADEVEA LAIERVKRLF NAGHANVQPH SGAQANGAVM LALAKPGDTV
LGMSLDAGGH LTHGAKPALS GKWFNALQYG VSRDTMLIDY DQVEALAQQH KPSLIIAGFS
AYPRKLDFAR FRAIADSVGA KLMVDMAHIA GVIAAGRHAN PVEHAHVVTS TTHKTLRGPR
GGFVLTNDEE IAKKINSAVF PGLQGGPLMH VIAGKAVAFG EALTDDFKTY IDRVLANAQA
LGDVLKAGGV DLVTGGTDNH LLLVDLRPKG LKGAQVEQAL ERAGITCNKN GIPFDPEKPT
ITSGIRLGTP AGTTRGFGAA EFREVGRLIL EVFEALRTNP EGDHATEQRV RREIFALCER
FPIY