Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2104 |
Symbol | fdhA |
ID | 3694539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2564888 |
End bp | 2566087 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637732358 |
Product | glutathione-independent formaldehyde dehydrogenase |
Protein accession | YP_337255 |
Protein GI | 76818045 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCA ACCGAGGTGT CGTGTATCAG GGGCCGGGCA AGGTCGAAGT GCGGAAGATC GACTATCCGA AGATGGTCGA TCCGAGCGGC CGCGCGATCG GCCACGGCGT GATCCTGAAG GTCGTCAGCA CGAATATCTG CGGCTCCGAT CAGCACATGG TGCGCGGCCG CACGACGGCG CCCGTCGGTC TCGTGCTCGG CCACGAGATC ACGGGCGAGG TGATCGAGGT CGGCCGCGAT GTCGAGACGC TGAAGATCGG CGATCTCGTA TCGGTGCCGT TCAACGTCGC GTGCGGCCGC TGCGCGATGT GCAAGGAGCA GCACACGGGC GTGTGCCTGA ACGTGAATCC GGCGCGCGCG GGCGGCGCGT ACGGCTATGT CGACATGGGC GGCTGGATCG GCGGGCAAGC CGAATACGTG CTCGTGCCGT ACGCCGACTT CAACCTGCTG AAATTCCCCG ATCGCGATCG GGCCATGGCG AAGATCCGCG ATCTCACGTG CCTGTCGGAC ATTCTGCCGA CCGGCTATCA CGGCGCGGTC ACGGCCGGCG TGAAGCCCGG CTCGACGGTT TACGTCGCGG GCGCGGGCCC GGTGGGGATG GCGGCCGCCG CGTCGGCGCG GCTGCTCGGC GCCGCATGCA CGATCGTCGG CGACATGAAC GCCGAGCGCC TCGCGCACGC GAAGGCGATG GGCTTCGAGG TGATCGATCT GTCGAAGGAC GCGACGCTCG GCGAGCAGAT CGAGCAAATC CTCGGCAAGC CGGAGATCGA TTGCGCGGTT GACTGCGTCG GCTTCGAGGC GCACGGCCAC GGCTCGTCCG GCCATGCGCA GGAGGCGCCC GCGACGGTGC TGAACTCGCT GATGGAAATC ACCCGGCCCG CGGGCGCGAT CGGCATTCCG GGCCTGTACG TGACCGACGA TCCGGGCGCC GTCGATGTCG CTGCCAAGCA CGGCAGCCTG AGCATTCGTT TCGGTCTCGG TTGGGCGAAA TCGCATTCGT TCCATACCGG CCAGACGCCC GTGCTCAAGT ACAGCCGCAA CCTGATGCAG GCGATCCTGT TCGACCGGCT GCCGATCGCG GAAATCGTCA ACGTGGCGGT GATTTCGCTC GACGACGCGC CGGAGGGCTA CAAGAAGTTC GACGGCGGCG CGCCGCGCAA ATTCGTCATC GATCCGCACG GGATGCTGAA GGCGGCCTGA
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Protein sequence | MSSNRGVVYQ GPGKVEVRKI DYPKMVDPSG RAIGHGVILK VVSTNICGSD QHMVRGRTTA PVGLVLGHEI TGEVIEVGRD VETLKIGDLV SVPFNVACGR CAMCKEQHTG VCLNVNPARA GGAYGYVDMG GWIGGQAEYV LVPYADFNLL KFPDRDRAMA KIRDLTCLSD ILPTGYHGAV TAGVKPGSTV YVAGAGPVGM AAAASARLLG AACTIVGDMN AERLAHAKAM GFEVIDLSKD ATLGEQIEQI LGKPEIDCAV DCVGFEAHGH GSSGHAQEAP ATVLNSLMEI TRPAGAIGIP GLYVTDDPGA VDVAAKHGSL SIRFGLGWAK SHSFHTGQTP VLKYSRNLMQ AILFDRLPIA EIVNVAVISL DDAPEGYKKF DGGAPRKFVI DPHGMLKAA
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