| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2101 |
|---|
| Symbol | sacC |
|---|
| ID | 3692932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 2559811 |
|---|
| End bp | 2561475 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637732355 |
|---|
| Product | levanase |
|---|
| Protein accession | YP_337252 |
|---|
| Protein GI | 76818627 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCGA TGTCGAACCC TCGCTTACGC TTTTCCTCCG TCGTTTACGG CCTCATCGCG
CTCGCCGCGT GTGCAAGCTT CGCCGCGCAT GCGGCGGGCG CGCGATGCGC GGCATCGCCC
GCGAAGTCCG CCGACGGCAC GCCGCAATGG CGGCCCGCGT TGCACTACAC GCCCCGACGC
AACTGGATGA ACGACCCGAA CGGCCTCGTC TACGAAAACG GCGTCTATCA CCTGTTCTAT
CAATACAATC CGCACGGCAA CTTCTGGGGC GACATGTCGT GGGGGCACGC GACGAGCCGC
GATCTCGTGC ACTGGGACGA GCAGCCGGTG GCGATGCCGG CGAACGCGCG CGAGGATATC
TTCTCCGGCT CCATCGTCGC GGACGCACGC AACACGTCGG GCCTCGGCAC CCCGAATGCG
CCGCCGCTCG TCGCGCTCTA TACGAGCGTC TACAAGGCGG GCTCCGGCCA CGAACCCGGT
ACGCAGGCGC AATCGCTCGC GTACAGCATC GATCACGGCA AGACGTGGCG GCCGTACGCG
CACAATCCGG TGCTGACGCT CGCGCCCGAA TCGCGGCATT TCCGCGATCC GAACGTGACG
TGGTACGCGC CGGGCGGTTA CTGGATGATG ACGGCGGTTG TCGCCGACGC GCCCGTCGTC
AAGCTGTATC GGTCGAGCGA CCTGATTCGC TGGGATTTCC TGAGCGACTT CACGCTGCCC
GACGTCCCGC ATCGCGGCGC GCTGTGGGAA ATGCCCGAGC TGCTGCCGAT GCCGCTCGAC
GGCGACGCCG CGCGCATGAA GTGGGTGATG ATCGTCAACG TCAATCCGTG GTCGATCGCG
GGCGGCTCGG GCGCGATGTA TTTCATCGGC GAGTTCGACG GCAGAACGTT CACGCCCGAT
CGCGCCGCGC CGGCGAACGC CGATCCCGCG CAATACTCGT GGCTCGATCA CGGTGCCGAC
TACTACGCGG CCGGCACGTT CGCGAACGCG CCGGGCGAGG GGCCGGTAGC GATCGCATGG
ATGAGCAATT GGGACTATGC GGAGCGCATT CCGACCACGC CGTGGAAAGG CGCGATGGCG
CTACCGCGCG AGCTCGCGCT GAAGACGATC GACGGCCGGC CGCGAGTGAC GGTCGCGCCC
GCGCGCGCGT TCGACGCGTT CGCCCGCACG CGGCCCGCCG TGCGTATCGG CTCGCTCGCG
GTCGCGTCCG CGACGCGAGA GCTCGGCGCC GACGCACGCG GCACCGTGCA GCGCATCGCA
GTGACGATCG AGCCGCGCTC GGCCAGGCGC GCCGGCTTGA TCGTGCGGCG CTCGGCGAAC
GGCCGCGTCG GCACGCGTAT CGTCTACGAT TCGTCGGCGC ACACGCTGAG CGTCGATCGC
TCGGCATCCG GCGAAACGAA CTTCTCGAAC GCGTTCAGCC AGCGGCATAT CGTTGCGCTA
CCGCTCGTGA ACGGGAAGCT GCGGCTCGAC GTGATCGTCG ATCGCGATTC CGTCGAAGTG
TTCGACGGCG ACGGCCGGAC CGTCATCACC GATCTCGTGT TTCCGTCGCC TGCCGACAAC
CGGCTCGCCG TGTTCGCCGA AGGCGGCGAC GCGACGTTCG GCGATGTCGT GGTGACGAAT
CTCGACGAGA CCGCGGGCGA GCGGCGAGGG TGCCCGACCT CATAG
|
|---|
| Protein sequence | MHSMSNPRLR FSSVVYGLIA LAACASFAAH AAGARCAASP AKSADGTPQW RPALHYTPRR
NWMNDPNGLV YENGVYHLFY QYNPHGNFWG DMSWGHATSR DLVHWDEQPV AMPANAREDI
FSGSIVADAR NTSGLGTPNA PPLVALYTSV YKAGSGHEPG TQAQSLAYSI DHGKTWRPYA
HNPVLTLAPE SRHFRDPNVT WYAPGGYWMM TAVVADAPVV KLYRSSDLIR WDFLSDFTLP
DVPHRGALWE MPELLPMPLD GDAARMKWVM IVNVNPWSIA GGSGAMYFIG EFDGRTFTPD
RAAPANADPA QYSWLDHGAD YYAAGTFANA PGEGPVAIAW MSNWDYAERI PTTPWKGAMA
LPRELALKTI DGRPRVTVAP ARAFDAFART RPAVRIGSLA VASATRELGA DARGTVQRIA
VTIEPRSARR AGLIVRRSAN GRVGTRIVYD SSAHTLSVDR SASGETNFSN AFSQRHIVAL
PLVNGKLRLD VIVDRDSVEV FDGDGRTVIT DLVFPSPADN RLAVFAEGGD ATFGDVVVTN
LDETAGERRG CPTS
|
|---|
| |