| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2089 |
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| Symbol | |
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| ID | 3692055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2543176 |
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| End bp | 2544891 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637732343 |
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| Product | hypothetical protein |
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| Protein accession | YP_337240 |
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| Protein GI | 76819156 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0458657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGC TACGAAACCT CTCCTCCACG CTGCGCCGCG TATCGATGGC ATCCAACATG
CTCGATCGCG CGGCGGCGAA TCCGGATCTC GTGACGCGCG TGCCGACGCT GTCGTCGCTG
TCGAGCGCGG CGATGACGAG CTCCGCCGTA TCGACCACCG GCACGACGAA CACGGTGGCG
TCGGGCGGCG CGGCCGCGGG CGCGCCGAGC TTCGCGCCGC CGGCCGCCGA CGCGTTTCCC
CAAGCCGACG GCGCGCCCCG CAACCCCGCG GTGCTGCAAT TCCCGGTGCC GGGCGGCGCG
CCCGCGCCCG CCGACGCGCG GGTGGCCGCG CCCGTCGTCT ACAGCGCGCA GGGCGAGCAG
GCCGCGATCA TGAAAGCAGG CCTGCAGCAG GCGAGCTGGA ACAACCCGTT CGTGTCGCAC
GCGCTGCCCG CGGTGCTGCA ACTGCAGCGC CACCTCGCGG CCGGCCCGCT CAATCAGGCC
GCGATCCGCA CGCAGCTCGG CCTCGAGGTG CGGCTCTACC GCGAGCGGCT CGCCGCCTCC
GGCTGCGAAT GGGAGCAGAT CCGCGACGCG TCGTACCTGC TCTGCACGTA TCTCGACGAA
ACCGTCAACG ACGCGGCGCG CGAGCACGCG CAAGTCGTCT ACGACGGCGA GCGCAGCCTG
CTCGTCGAAT TCCACGACGA CGCGTGGGGC GGCGAGGACG CGTTCGCCGA CCTGTCGCGC
TGGATGAAGA CCGAGCCGCC GCCGATTCCG CTTCTGTCGT TCTACGAACT GATCCTGTCG
CTCGGCTGGC AGGGCCGCTA CCGCGTGCTC GACCGCGGCG ACGTGCTGCT GCAGGATCTG
CGCTCGCAAC TGCACGCGCT GATCTGGCAT CACGTGCCGC CCGAGCCGCT CGGCACCGAG
CTCGTCGCGC CCGCGAAGCG GCGCCGCTCG TGGTGGACGG CCGGGCGCGC GGCGGCCGTC
GCGCTCGGCG TGCTGGTGCT CGCGTACGGC GCGATCAGCT TCTGGCTCGA TTCGCAGGGC
CGCCCGATCC GCAACGCGCT CGCCGCGTGG ATGCCGCCCA CGCGCACGAT CAACATCGCC
GAGACGCTGC CGCCGCCGCT GCCGCAGATT CTCACCGAAG GGTGGCTCAC CGCGTACAAG
CATCCGCAAG GATGGCTGCT CGTGTTCAAG AGCGACGGCG CGTTCGACGT CGGCAAGGCG
AACGTGCGGG CGGACTTCAT GCACAACATC GAGCGGCTCG GCCTCGCGTT CGCGCCGTGG
CCGGGCGACC TCGAGGTGAT CGGCCACACC GATTCGCGGC CGATCCGCAC GAGCGAGTTC
CCGGACAACC AGGCGCTGTC CGAAGCGCGG GCGCGCAACG TCGCCGACGA ACTGCGCAAG
ACCGCGCTGC CGGGCGGCGC GCGCGCGCCG GAGAACGCGG TGCAGCGCAA CATCGAGTAC
TCGGGGCGCG GCGACGCGCA GCCGATCGAC ACCGCGAAGA CGGCCGCCGC GTACGAGCGC
AACCGCCGCG TCGACGTGCT GTGGAAGGTG ATTCCCGACG GCGCGCAGCA ATCGGGCCGC
AGCCTGAACC TGCAGCAGCC GGAGAAGCCC GGGCAGGTGC CGATGCGTCC GGCGATGCCG
GAGGGCGTGG AGATCGCGCC TGACGGGCAA CTGCCGTATG CGACGTCAAC CACGATGCCA
GCAACGAGAC CGACCACGGA GGGCCGTCAG CCATGA
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| Protein sequence | MSLLRNLSST LRRVSMASNM LDRAAANPDL VTRVPTLSSL SSAAMTSSAV STTGTTNTVA
SGGAAAGAPS FAPPAADAFP QADGAPRNPA VLQFPVPGGA PAPADARVAA PVVYSAQGEQ
AAIMKAGLQQ ASWNNPFVSH ALPAVLQLQR HLAAGPLNQA AIRTQLGLEV RLYRERLAAS
GCEWEQIRDA SYLLCTYLDE TVNDAAREHA QVVYDGERSL LVEFHDDAWG GEDAFADLSR
WMKTEPPPIP LLSFYELILS LGWQGRYRVL DRGDVLLQDL RSQLHALIWH HVPPEPLGTE
LVAPAKRRRS WWTAGRAAAV ALGVLVLAYG AISFWLDSQG RPIRNALAAW MPPTRTINIA
ETLPPPLPQI LTEGWLTAYK HPQGWLLVFK SDGAFDVGKA NVRADFMHNI ERLGLAFAPW
PGDLEVIGHT DSRPIRTSEF PDNQALSEAR ARNVADELRK TALPGGARAP ENAVQRNIEY
SGRGDAQPID TAKTAAAYER NRRVDVLWKV IPDGAQQSGR SLNLQQPEKP GQVPMRPAMP
EGVEIAPDGQ LPYATSTTMP ATRPTTEGRQ P
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