Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2082 |
Symbol | vgrG5 |
ID | 3694234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2534464 |
End bp | 2536752 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637732336 |
Product | Rhs element Vgr protein |
Protein accession | YP_337233 |
Protein GI | 76819730 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTGA TCGAACTGCG CAGTCCCCTG CTGGACCCGG ACGCCGTCGC GCTGAGCTTC GTGGTGCATG AGAACCTGTC GCAGGAGCCG TCGTATCAGC TCGATCTGCT GAGCCACGAT TCGAATCTGG ACTTCGACGC GCTGCTCGGC TCGACGCTGT CGGCCGACAT CGACCTGGGC GAAGGCGACA TCCGGACGTT CAACACGCAC GTGTTCGGCG GCTACGACAC GGGGCAGATG AGCGGGCAAT ACACGTACAC GCTGGAGCTG CGAAGCTGGT TGTCGTTTCT CGCTGAGAAC CGCAACAGCC GGATCTTCCA GGATTTGAGC GTGCCGCAGA TCGTCGAGCA GGTGTTCCAG GGCCATCAGC GCAACGGCTA CCGGTTCGAG CTCGAAGGCA CGTACGAGCC GCGCGAGTAC TGCGTGCAGT TCCAGGAAAC GGATCTGAAC TTCGTGAAGC GGCTGCTGGA GGACGAAGGG ATCTACTTCT GGGTGGAGCA CGAGCCGGAT CGTCATGTGG TGGTGATCTC GGACACGCAG CGGTTCGAGG ATCTGCCGCT GCCGAACGAC ACGCTGGAGT ATCTGCCGGA TGGCGAGGAG TCGCGCGCGA TCCAGGGGCG CGAAGGGGTG CAGCGGCTGC AGCGCACGCG GCGGATCAAG TCGAACAACG TCGCGCTGCG GGATTTCGAC TATCACGCGC CGTCGAAGCA ACTGGACAGC GACGCGCAGG TCGAGCAGCA GAGTCTCGGC GGCATTCCGC TCGAGTACTA CGACTACGCG GCCGGCTACC GCGACCCCGA GCAGGGCGAG CGTCTCGCGC GGCTGCGGCT CGAAGCGATT CAGGCTGATG CACACGCGCT CGGGGGCGAG GCGAACGCAC GCGCGCTGGC GGTGGGTCGC GCGTTCACGC TGGTCGGCCA TCCGGCGCTG AGCCGCAATC GTCGGTACTA CGTGACGAAC AGCGAGCTGA CGTTCATCCA GGACGGACCG GACAGCACGT CGCAGGGGCG CAACGTCGCG GTGAAGTTCC GCGCGCTCGC CGACGATCAG CCGTTTCGGC CGCTGCTCGT CACCAAGCGG CCGCGCGTGC CGGGCATCCA GAGCGCGACG GTGGTGGGCC CGGAGATGTC GGAGGTGCAT ACCGACAAGC TCGGGCGGAT TCGCGTGCAC TTCCACTGGG ACCGCTACAA GACGACCGAG GCGGACGCGT CGTGCTGGAT TCGCGTGACG CAGGCATGGG CGGGCAAGGG CTGGGGCGTG CTCGCGATGC CGCGGGTCGG GCAGGAAGTC ATCGTCGTGT ATGTCGACGG CGATCTCGAC CGACCGCTCG CGACGGGCAT CGTCTACAAC GGCGAAAACC CGACGCCTTA TGACCTGCCG AAGGATATCC GCTACACGGG CCTCGTCACA CGCTCGATCA AGCGGGCGGG CGGCATTCCG AATGCGAGCC AACTGACGTT CGACGATCAG CACGGCGCGG AGCGCGTGAT GATCCACGCG GAGCGCGACT TGCAGCAGAC GGTCGAGCGC AACAGCTCGA CGTCGATCGC GCAGGATCTG AACCTGTCGG TGAAGGGCAC GTCGACGTCG GTCGTCGGCA TCTCGGTCAG CTTCACGGGC ATCTCGGTGT CGTACACGGG GTTGTCGGTG AGCTTCACCG GCGTGTCGGC GAGGTTCACG GGCGTGAGCA CGTCGTTTAC CGGCGTGAGC ACGAGTTTCA CCGGCGTGTC GACGTCGTTT ACCGGCGTCG ATACCAGCTT CACCGGCGTC TCGACCGGAT TCAAGGGCGT CGACACGAGC TTCACCGGCG TCGCGACGTC GATGGTGGGC GTGTCGACGA GCATCACGGG CTCCAGCAAT TCCGTGACGG GCGTGTCGAA CAGCATGACG GGCATCTCGT CTTCCTGGAA GGACGTGAGC ATGTCGACGA CCGGCCAGTC CGAAAGCATC ACGGGAGTAT CGCTGTCGTA CACGGGCACG TCGAACAGCA TGACGGGCAC GAGCACGTCG GTGACGGGCA CCTCGACGAG CATCACCGGC ACGTCGATGT CGAACACCGG CAGCTCGACG AGCATCACGG GCACATCGAT GTCGACGACG GGCAGCTCGG TGAGCACGAC GGGCTCGAGC ATGTCGGCCA CCGGCAGTTC GGTGGGCACG ACGGGCTCGA GCGTATCGAC GACGGGAAGC AAGATGTCGG TCACCGGCTT CAGCTTCTCG TATACGGGAG CGAGCTACGA GGATGTGGGC GTCGATCTGA AAAAGCTCGG GATGCAGACG AAGAACTGA
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Protein sequence | MRLIELRSPL LDPDAVALSF VVHENLSQEP SYQLDLLSHD SNLDFDALLG STLSADIDLG EGDIRTFNTH VFGGYDTGQM SGQYTYTLEL RSWLSFLAEN RNSRIFQDLS VPQIVEQVFQ GHQRNGYRFE LEGTYEPREY CVQFQETDLN FVKRLLEDEG IYFWVEHEPD RHVVVISDTQ RFEDLPLPND TLEYLPDGEE SRAIQGREGV QRLQRTRRIK SNNVALRDFD YHAPSKQLDS DAQVEQQSLG GIPLEYYDYA AGYRDPEQGE RLARLRLEAI QADAHALGGE ANARALAVGR AFTLVGHPAL SRNRRYYVTN SELTFIQDGP DSTSQGRNVA VKFRALADDQ PFRPLLVTKR PRVPGIQSAT VVGPEMSEVH TDKLGRIRVH FHWDRYKTTE ADASCWIRVT QAWAGKGWGV LAMPRVGQEV IVVYVDGDLD RPLATGIVYN GENPTPYDLP KDIRYTGLVT RSIKRAGGIP NASQLTFDDQ HGAERVMIHA ERDLQQTVER NSSTSIAQDL NLSVKGTSTS VVGISVSFTG ISVSYTGLSV SFTGVSARFT GVSTSFTGVS TSFTGVSTSF TGVDTSFTGV STGFKGVDTS FTGVATSMVG VSTSITGSSN SVTGVSNSMT GISSSWKDVS MSTTGQSESI TGVSLSYTGT SNSMTGTSTS VTGTSTSITG TSMSNTGSST SITGTSMSTT GSSVSTTGSS MSATGSSVGT TGSSVSTTGS KMSVTGFSFS YTGASYEDVG VDLKKLGMQT KN
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