Gene BURPS1710b_A2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A2017 
SymbolpotI 
ID3693676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2453307 
End bp2454236 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID637732271 
Productputrescine transport system permease protein 
Protein accessionYP_337168 
Protein GI76819687 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGC CCAACAAGCC GCTTTGCGCC GGCGTGCTGA CGCTCGGCTT CCTGTTTCTC 
TACATCCCGA TCGTGAGCCT CGTCGTCTAT TCGTTTAACG AATCGAAGCT CGTCACGGTG
TGGTCAGGCT TCTCGCTGAA GTGGTACGCG GCGCTCTGGC GGGACGACGA ACTGCTGACG
AGCGCGTGGC TATCGCTGAA GATCGGCCTG CTGACCGCGT TCGCGTCGGT GTTCATCGGC
ACGTGGGCAG GCTTCGTGCT CGCGCGCTTC GGACGCTTTC GCGGCTTCAC GCTGTACACC
GGCATGATCA ACGCGCCGCT CGTGATTCCC GAAGTGATTC AGGGCATCTC GCTGTTGCTG
CTGTTCGTCG CGCTCGAGCA GATGGCCGGC TGGCCGAAGG GGCGCGGGAT GGTGACGATC
TGGATCGGCC ACGTGATGCT GTGCGTGTCG TACGTCGCGA TCATCGTGCA GTCGCGCGTG
AAGGAGCTGA ACAAGGCGCT CGAGGAAGCG GCGCTCGACC TCGGCGCGAC GCCGCTGAAG
GTGTTCTTCG TGATCACGCT GCCGCTGATC TCGCAGGCGC TGCTCTCCGG CTGGCTGCTG
TCGTTCACGC TGTCGATCGA CGATCTCGTG CTCTCCGCGT TCCTCTCCGG CCCCGGCTCG
ACGACGCTGC CGCTCGTCGT GTTCTCGCGC GTGCGCCTCG GCCTGAACCC CGAAATGAAC
GCGCTCGCGA CGCTCTTCAT CACGGCGGTG ACGATCGGCG TGATCGCCGT CAACCAGATG
ATGCTGAGCC GCGAACGCCG GCGCGAACGC GACATGCGCC AGGCGTTCGC GCCGCCCGCG
CCGTGCGATT CGCCCGAATC CGGCCCGGCC GGCGGCGCGC CGCGCGCGGC GCGCGCCGCC
GCGACGCGCA AGCCGCTCGG CGCCGCCTGA
 
Protein sequence
MIKPNKPLCA GVLTLGFLFL YIPIVSLVVY SFNESKLVTV WSGFSLKWYA ALWRDDELLT 
SAWLSLKIGL LTAFASVFIG TWAGFVLARF GRFRGFTLYT GMINAPLVIP EVIQGISLLL
LFVALEQMAG WPKGRGMVTI WIGHVMLCVS YVAIIVQSRV KELNKALEEA ALDLGATPLK
VFFVITLPLI SQALLSGWLL SFTLSIDDLV LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN
ALATLFITAV TIGVIAVNQM MLSRERRRER DMRQAFAPPA PCDSPESGPA GGAPRAARAA
ATRKPLGAA