| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1967 |
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| Symbol | rfaF |
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| ID | 3692399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2407369 |
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| End bp | 2408625 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637732221 |
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| Product | putative heptosyltransferase (O-antigen related) |
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| Protein accession | YP_337118 |
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| Protein GI | 76818700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.422645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATG AGCGCGCGGC GAAGCGATGG CCCGCGCGCG GCGAAGACAT GAAAATACTG
TTCATCAAGC TCTCCGCATT GGGCGACGTG CTGGCCAGCA CGCCGCTGTT CGCGTCGACC
AAGGCCGAGC ATCCGGACTG GTTCGTCGGG CACGTGGTGG CGCGTCCCTA TGCGGCTGCG
ACGCGAAACA ATGCGCACGT CGATGCGCAA TTCATTGTCG ATTCGCCGCT GTCCGGTGGC
GCGATTCGGA AAATCAGGGT GGCGGCGCAA ATATGGCGGT ACATGATGCG CGAACGATAC
GACATCGCGG TTGTGCTGCA TCGGAGTTTT GTACTACAAC TGATATGTCG CCTCGCATCG
GTCAGGAAAA CCATCGGCTA TGAAAGCCGA TTTTCATTCA TATTGAGCCA CTCCATTCCG
TTTTCGATGC AGGGAAATCG AAGCGGGCTG GAATTGCGTT TGCTGAAGTC GGCGGGAATC
ATCCACGACG AAAAGAAGAA ATTGAGGTTC GACATCGATT TCGGGAACGT GGACCGAAAC
CGGCTGCGCG CGTTGCCCGC CGCGTTCATC GCCGTCAACG CGGGCGGCGG CAACGCGGAT
GCGCAGGCAG CCAACAAGCT GTGGCCCGCC GAGCGTTACG GTGCATTGAT CAAGCGGTTG
CCGTTGCCGG TCGTGATGCT CGGACACGGC GCGGCGGATG AAGACATCAG GGATCGGGTC
GCGGCGACGG GGGCGAGGTT CGTCGACATG GTCGGCAAGA CGAATCTCGA CGAGACGGCG
GTCATCCTCG AACGCTCGCG TCTGTATGTG GGCAACGACA GCGCGCTTTT GTATCTCGCG
GCATCGCTCG GCGTGACGAC GATCGGGATC TACGGGCCTA CCGATCCCGC CGCGTTCAGT
CCGTTGGGCG CGAACAATCT GTGGCTGAGT GGCAAGACGT CCTGTGCACC GTGTTATTCG
TCGTTCGACG GGATCGGCGG GCGCATGTAC ACGTGCACGA ACAACATTTG CATGCAGGCC
GTTACGGTCG AATCCGTCAG CGAGAGAATC CATGCAGCCC TCCATCAAGA TCAGAATCTA
CAAGCGGCTG GACCGGATGT TGTCGGATCT GGTCAGGGCC GTGCCGCATC CGAAACGCGC
GCTCGGGCGG ACACCGACGC GCGTGCTGAT CATCAAGCTC TCGGCGATGG GGGATTCGCT
GTGCCTCTTT CCCACCGTTC GGCAACTGGC GCTCGCGTTC CCGGGCGCGA CGATTGA
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| Protein sequence | MADERAAKRW PARGEDMKIL FIKLSALGDV LASTPLFAST KAEHPDWFVG HVVARPYAAA
TRNNAHVDAQ FIVDSPLSGG AIRKIRVAAQ IWRYMMRERY DIAVVLHRSF VLQLICRLAS
VRKTIGYESR FSFILSHSIP FSMQGNRSGL ELRLLKSAGI IHDEKKKLRF DIDFGNVDRN
RLRALPAAFI AVNAGGGNAD AQAANKLWPA ERYGALIKRL PLPVVMLGHG AADEDIRDRV
AATGARFVDM VGKTNLDETA VILERSRLYV GNDSALLYLA ASLGVTTIGI YGPTDPAAFS
PLGANNLWLS GKTSCAPCYS SFDGIGGRMY TCTNNICMQA VTVESVSERI HAALHQDQNL
QAAGPDVVGS GQGRAASETR ARADTDARAD HQALGDGGFA VPLSHRSATG ARVPGRDD
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