| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1959 |
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| Symbol | kpsD |
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| ID | 3694252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2395690 |
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| End bp | 2398317 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637732213 |
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| Product | capsule polysaccharide export system periplasmic protein |
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| Protein accession | YP_337110 |
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| Protein GI | 76817935 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.940843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGGC GTCGGCGCGC CGACGATGTG TTGCAGAAAG CGAGATGTTC AATTGACCGA
AAGACAAGAA GCCGAATGAA CGTCAAGAGC CCTATTCTCC GGCACCCGCG TACATGGGCT
GGTTTTTCGT TCCGCGATGG TCTGCCGTTC ATTCGTTTCG CCTCCCTGCG TTTGCTCGCG
TGGCTGCTTC GCTGCGCCGT GTGTTTGTGG CCGTGCGCGT TCCCTGTGTT CGCGCATGCG
CAAATCGTCC CTTTCGTTCC GTCTGCATCC GCCGGCGCGG ACGCGCGTTC GGCGGTGCCG
CTGCCGCCGA TCGACAGCCT GCCGGCGGCG GACGGCCTGA GCGCGCGGCA ACGCGACGCG
CTTCAGCCGC CGCTGCCGGG CGCGAAGCTG ACGAAGGACG CCACGACGAA AGACGGCCTG
TTGAAGGACG GCGCCGCGCT GAATGAGCCG CCGCGCCCCT GCGGGCCGCT CGGATGTCGT
GGCGAAGCGA TCGATTGCCC GCCGTCGGCC GACGGCCGGC CGACGTCCAT TACGCGCCGG
GCGGACGGCA CGCCCGAATT GCCGGATCCG TGCGGGCGGC CGCGCGCCGC TTCGCAACCG
GCGCTGACCG ATTTTCAGGT CTTCGTGCAG CAGAGCACGG GCCGCGCGTT GCCGCTGTTC
GGCTACAACT TCTTTTCGAC GACGACGACC TACCGGTCGC TCGACAACGT TCCGGTTCCC
GACGATTACG TGCTCGGCCC CGGCGACGAA GTGCTGCTGC ACGCGTGGGG CGGCGTCGCG
GGCGATCAGC GCCTCGTCGT CGACCGCAAC GGTCAGGTGA GCATTCCGGG CGTCGGTGTC
GTGACGGTGG CGGGCGCGCG CGCGTCCGAG CTCGATTCGC TGCTGCGCGG CGGGCTTGGC
CGATATTTCA CGGATTTCAA CGTGAATGCG GCGCTCGGGC GTCTGCGATC GATCCCGGTG
TATGTCGTCG GCAAGGCGAT GTCGCCCGGC AGCTACACGG TGCCCGGCAC GTCGACGATC
ATCGGCGCGT TGTTCGCGAG CGGCGGCCCC GCGTTCAACG GCTCGATGCG CGCGGTGGCG
CTGTATCGCA ATGGCCGGCA GATCGCCGCG CTCGACGTCT ACGGCTTTCT CACGCGCGGC
GCGGTGAAGG ACGATGTCCA TCTGCTGCCG GGCGACGTCA TCGTCATTCC GCCCGCCGGG
CCGCGCATCG CGCTGACGGG CGCGCTCGAC GCGCCCGGCA TCTACGAGCT GCGCAAGACG
AGCGAAACGT TGCGCGAGCT GCTCGACGAC GCGGGCGGCG TCACCGCGCT CACGAGCCTC
GACCGCGTGA TGATCGAACG GGTGAACCCG GCCGACGGCG CCGCGCCGCG TTCCGTGCAG
GAAGTGCGGC TCGACGAAGC GGGGCTCGCG ACGGTCGTGA AGGACGGCGA CATCGTGACG
CTGTCGATGG TGTCGCAGAA ATTCTCGAAC GCCGTGACGC TGCGCGGCAA CGTCGCCGCG
GCGCTCAGGT ATCCGTACAA ACCGGGCATG ACGCTCGCCG ATTTGCTGCC GTCCCCGGAG
GCCGTGCTGA CGCCCGACTA CTTCACGCGC AAGAACATTC TCGTCGAATA CGCGAAGAGC
GGCGGCGCCG ACCGGCGGCC GTTCGACGGC ATCCGCAATC TCGTCGACGA GCCCAACTGG
CACTACGCGA TCATTCAGCG GCTCGACCCC GTCACGCTGA CCGAGAACGT GATCGCGTTC
AACCTGCGCG CGGTGATGAC GAAAGGCAGC GCCGAGGCCG GCATCGCGCT GCAGCCCGGC
GACGTGGTGA CGATTTTCGG CAAGCGGGAC CTGCGCAACC CGGTCGACGA CAACAAGAGC
CTCGTTCGCG TGGACGGCGA AGTGCGCGCA CCCGGCGTCT ACCAGCTCAA CGCGGGCGAA
TCGCTGCGCG AGCTGCTGCA GCGCGCGGGC GGCCTGACAA GCAACGCGTA TGTGTTCGGC
CTCGAATTCA CGCGCGAATC CACCCGCAGC CAGCAGCAGC AGAACCTGAA CGCCGCGCTC
GACCGCGCGA CGTTGCAGGC GAACAGCAAG CTCGCCGCGG CGCTCGCGAA CCTGCCGAGC
GGCGACACGC AGTATCTGCA GGCTCAGATG GCGGCCGCGC AGCAGGCGCA ACTCGCGCGG
CTGCGCGAGC TCAAGCCGAC GGGGCGCGTG TCGCTCGAGC TGAGCACGCG CGCGAGCCGC
ATCGGCGATC TGCCCGATCT GCCGCTGAAC GACGGCGATG CGATTTACGT GCCGCCGGTG
CCGGCGTTCG TGACCGTCTA CGGCGCGGTC GACAATCAGA ACGCGGTGAT CTGGAAGCTG
CATCGAACGG TCGCCGATAC GTTGAGGGTC GCGGGCGTCC AGCGGGACAT CGCGGACCTC
GACGCCGCAT TCGTGCTGCG CGCCGACGGC AGCGTCGCGT CGGCGAGCAG CGCCGGCTGG
TTCGGCAGCT TCGGCGCGCT CGAGCTGATG CCGGGCGACG CGCTCGTGGT TCCCGAGAAG
CTCGACCGGC GCACCGCGAT GACGAAGTTC CTCGCCGGCC TCAAGGACTG GTCGCAGGTG
CTGGCCAATT TCGGCCTGGG CGCGGCGGCA ATCAAGGTGC TCAAGTAA
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| Protein sequence | MIRRRRADDV LQKARCSIDR KTRSRMNVKS PILRHPRTWA GFSFRDGLPF IRFASLRLLA
WLLRCAVCLW PCAFPVFAHA QIVPFVPSAS AGADARSAVP LPPIDSLPAA DGLSARQRDA
LQPPLPGAKL TKDATTKDGL LKDGAALNEP PRPCGPLGCR GEAIDCPPSA DGRPTSITRR
ADGTPELPDP CGRPRAASQP ALTDFQVFVQ QSTGRALPLF GYNFFSTTTT YRSLDNVPVP
DDYVLGPGDE VLLHAWGGVA GDQRLVVDRN GQVSIPGVGV VTVAGARASE LDSLLRGGLG
RYFTDFNVNA ALGRLRSIPV YVVGKAMSPG SYTVPGTSTI IGALFASGGP AFNGSMRAVA
LYRNGRQIAA LDVYGFLTRG AVKDDVHLLP GDVIVIPPAG PRIALTGALD APGIYELRKT
SETLRELLDD AGGVTALTSL DRVMIERVNP ADGAAPRSVQ EVRLDEAGLA TVVKDGDIVT
LSMVSQKFSN AVTLRGNVAA ALRYPYKPGM TLADLLPSPE AVLTPDYFTR KNILVEYAKS
GGADRRPFDG IRNLVDEPNW HYAIIQRLDP VTLTENVIAF NLRAVMTKGS AEAGIALQPG
DVVTIFGKRD LRNPVDDNKS LVRVDGEVRA PGVYQLNAGE SLRELLQRAG GLTSNAYVFG
LEFTRESTRS QQQQNLNAAL DRATLQANSK LAAALANLPS GDTQYLQAQM AAAQQAQLAR
LRELKPTGRV SLELSTRASR IGDLPDLPLN DGDAIYVPPV PAFVTVYGAV DNQNAVIWKL
HRTVADTLRV AGVQRDIADL DAAFVLRADG SVASASSAGW FGSFGALELM PGDALVVPEK
LDRRTAMTKF LAGLKDWSQV LANFGLGAAA IKVLK
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