Gene BURPS1710b_A1950 details

Gene Information

• Locus tag: BURPS1710b_A1950
• ID: 3692782
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 2369004
• End bp: 2369693
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637732204
• Product: integrase core subunit
• Protein accession: YP_337101
• Protein GI: 76818926
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2801] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00677093
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTCGC CGATGGAACG CCGGGCGCTG ATTGAGGAGT CGCCGTCGTT CGGGTATCGG 
ACGCTCGCGC ATTTGCTTGG GTTCAACAAG AACACGGTGC AGCGAATCTT CCGATTGATG 
GGCTGGCAGG TTCGGATGCG GCCGATTGGC TTTCGGCCTC GCGTACAAGC CATGCCGTCG 
GTGGCCACAG CGCCGAACGA ACGCGGGTCG ACCGATATGT GCCGCGTTTG GGCTGGGCGT 
GATGGGTGGG TGACGCTGGC GCGGGTGATC GATTGCCATA CGCGGGAGTT GCTAGGCTGG 
CATTTGTCAC GTAGCGGTAG GGCCAGCACA GCCTCGAGCG CGTTGGAGCA TGCGCGGATC 
GCTCGGTTCG GCACACTCGG GCGTGTGCCT AAGCCGTTCC TGCTGAGAGG CGACAACGGG 
CTAGTCTTTA CCAGCCGCGA CTACACGGCT CTGGTACGCA GTTACGGTCT GCGGCAGGCG 
TTCATCACGC CGCACTGTCC GCAACAGAAC GGAATGGTCG AGCGCGTGAT CCGCACGCTC 
AAGGAGCAAT GCGTACACCG ACACCGCTTC GAGACGCTGC AGCATGCCAG CCGCGCCATT 
GCCGACTGGA TCCAGTTTTA CAACCATCGA CGGCCTCATC AGGCGCTGAA GATGAAAACG 
CCGGCTGAGG CATTCGCGTT AGCCGCTTAA 

 

Protein sequence

MYSPMERRAL IEESPSFGYR TLAHLLGFNK NTVQRIFRLM GWQVRMRPIG FRPRVQAMPS 
VATAPNERGS TDMCRVWAGR DGWVTLARVI DCHTRELLGW HLSRSGRAST ASSALEHARI 
ARFGTLGRVP KPFLLRGDNG LVFTSRDYTA LVRSYGLRQA FITPHCPQQN GMVERVIRTL 
KEQCVHRHRF ETLQHASRAI ADWIQFYNHR RPHQALKMKT PAEAFALAA