| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1940 |
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| Symbol | |
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| ID | 3692877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2355000 |
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| End bp | 2357423 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637732194 |
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| Product | sodium:solute symporter family protein |
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| Protein accession | YP_337092 |
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| Protein GI | 76818533 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGCGC AGGGGCTTTT TGCTACACAA GCGCATGGCC GCTTCTTCCG GTACTTCTTC
GCCCACGCCG TCGCATGCCG CCGAACCCCC GTTCGTGCCG GCGCCGCTCG CGCGCGCGCA
TGCGCGCTAC TGGCGTTTCA ACGTCGCGCT GATCGCGGTG CTGATGACGA TCGGCTTCGC
CGTGTCGTTC CTCGTGCCGC TGTTCGCGCC GGCGCTCGCG CACGTGCGCT TCGCGGGCTT
CAGCCTGCCG TTCTACGTCG GCGCGCAAGG CGCGATCCTC GTCTATCTGG GGTTGATCGG
CGCTTACATC GTGCTGATGC AGCGCGCGGA CCGGGTCCTG CGGCGCGACT ACGACGCGTA
CGCGGCCGAA GCGAAGCGCC GCGCCGCCGC CTCGACGGAC GCCGACGCAT GCTGACGAAT
CGGCTGGTTC GCGCGTACGC GCTGTACACG ATCGGCTTCG CCGCGTTCGT GCTGCTGCTG
TGGCGGATCG AGCGCGCGAC CGGGCCGGGC GTGTGGATCG GCTATGTGTT CCTGTTCGTG
CCGATCGCGG TCTATGCGGT GATCGGGCTG CTGTCGCGGA CATCGGACCT CGTCGAATAC
TACGTGGCCG GGCGGCGCGT GCCGTCCGCG TTCAACGGCA TGGCGACCGC CGCCGACTGG
CTGTCCGCGG CGTCGTTCAT CGGCCTCGCG GGCTCGCTGT ACGCGACCGG TTACGACGCG
CTCGCGTACC TGATGGGCTG GACGGGCGGT TTCTGCCTCG TTGCGTTCCT GCTCGCGCCA
TACGTGCGCA AGCTCGCGCG CTACACGATT CCCGATTTTC TGGGCACGCG CTTTTCGAGC
ACGCTCGTCA GGGCGCTCGC GGCGATCGCC GCGATCCTGT GCTCGTTCGT CTACCTGGTC
GCGCAGATAC AGGGCATCGG CCTCATCGCG ACGCGCTTCA TCGGCGTCGA TTTCTCGATC
GGCATCTTCT GCGGCCTCGC GGGGATTCTC GTGTGCTCGT TTCTGGGCGG GATGCGGGCG
GTCACGTGGA CGCAGGTCGC GCAGTACATC ATCCTGATCA TTGCGTTCCT GCTGCCGGTT
TCGCTGATCG CGATGAAGAA CGGCCTCGGG CCCGTGCCGC AATTCAATTA CGGCCATCTG
ATGTCGCGGG TCGAAACGCT CGAGGGCGAG ATGCGCGACG CGCCGCAGGA GCGGCAGGTG
CGCGAAACGT ATCGTCGGCA GGCGGGCGCG ATCCAGGCGC GGCTCGACCG GCTGCCGGCG
TCTTACGACG AGGCGCGCGC GAAGCTGGTC GATCAGGTCG CCGAGCTGCG CCGGCACAAC
GGGCCGCTGC GCGAGATCAA CCAGCGCGAA CGCGCACTTG CCGAGTTTCC GCGCGATCCG
GCGGCGGCGC GGGTGGTGTG GGAGCAGGCG CGCGACGAAC TGCTCGCGCG CGCGGCGGCC
CCGGTGCCGA TGCACGAGCC GTTTCCGGCC GCGAGCGGCG ACGATCGCCG CCCGCGCGGG
CGCAACTTCC TCGCGCTGCT GCTGTGCTTG TCGCTCGGCA CGGCGAGCCT GCCGCACATC
CTGACGCGCT ACAACACGAC GACCTCGGTG GCGGCTGCGC GGCGCTCGGT GGGCTGGACG
CTGTTTTTCA TCGCGCTGTT CTATTTGACG GTGCCGGTGC TCGCGGTGCT GATCAAGTAC
GAGATCCTGA CGAATCTGGT GGGGCGGCCG TTCGCCGATC TGCCCGCGTG GATCACGCAA
TGGCACCGTT TCGAGCCGGG GCTCATCGGC GTTGCCGACC TGTTGCGCGA CGGCATTGTC
CATTGGTCGG AGATCCAGAT GCAGCCCGAT ATCGTCGTGC TCGCGGCGCC GGAGATTGCG
GGGCTGCCGT ATGTGGTGTC GGGGCTGATC GCGGCGGGCG CGCTTGCCGC GGCGCTGTCG
ACGGCGGACG GGCTGCTGCT GACGATCGCG AACGCGCTGT CGCACGACGT CTACTACCAC
ATGGTTGCGC CGGACGCGTC GAGCCAGCGG CGCGTGACGA TCTCGAAGGT GCTGTTGCTC
GGCGTCGCGC TGTTTGCGTC GTATGTTGCG TCGCTGAATA CGGGGAAGAT TCTGTTTCTT
GTCGGGGCGG CGTTCTCGCT CGCGGCGTCG AGTTTCTTTC CGGTGCTCGT GCTGGGCGTG
TTCTGGAAGC GCACGACGAC GCGCGGCGCG GTGGCGGGGA TGATGACGGG GCTTGGCGTG
TGCGTGTACT ACATCGTATC GACGTATCCG TTCTTCACGC AGATCACGGG CTTCGCGGGG
CCGGGCTGGC TCGGCATCGA GCCGATCAGC TCGGGCGTGT TCGGCGTGCC GGCCGGGTTT
GCGACGGCGA TCGTCGTGAG CCTGCTGGAT CGGCGGCCGG ATGCGTACAC GAACGCGCTT
GTCGACTATA TCCGGCACCC GTGA
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| Protein sequence | MPAQGLFATQ AHGRFFRYFF AHAVACRRTP VRAGAARARA CALLAFQRRA DRGADDDRLR
RVVPRAAVRA GARARALRGL QPAVLRRRAR RDPRLSGVDR RLHRADAARG PGPAARLRRV
RGRSEAPRRR LDGRRRMLTN RLVRAYALYT IGFAAFVLLL WRIERATGPG VWIGYVFLFV
PIAVYAVIGL LSRTSDLVEY YVAGRRVPSA FNGMATAADW LSAASFIGLA GSLYATGYDA
LAYLMGWTGG FCLVAFLLAP YVRKLARYTI PDFLGTRFSS TLVRALAAIA AILCSFVYLV
AQIQGIGLIA TRFIGVDFSI GIFCGLAGIL VCSFLGGMRA VTWTQVAQYI ILIIAFLLPV
SLIAMKNGLG PVPQFNYGHL MSRVETLEGE MRDAPQERQV RETYRRQAGA IQARLDRLPA
SYDEARAKLV DQVAELRRHN GPLREINQRE RALAEFPRDP AAARVVWEQA RDELLARAAA
PVPMHEPFPA ASGDDRRPRG RNFLALLLCL SLGTASLPHI LTRYNTTTSV AAARRSVGWT
LFFIALFYLT VPVLAVLIKY EILTNLVGRP FADLPAWITQ WHRFEPGLIG VADLLRDGIV
HWSEIQMQPD IVVLAAPEIA GLPYVVSGLI AAGALAAALS TADGLLLTIA NALSHDVYYH
MVAPDASSQR RVTISKVLLL GVALFASYVA SLNTGKILFL VGAAFSLAAS SFFPVLVLGV
FWKRTTTRGA VAGMMTGLGV CVYYIVSTYP FFTQITGFAG PGWLGIEPIS SGVFGVPAGF
ATAIVVSLLD RRPDAYTNAL VDYIRHP
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