Gene BURPS1710b_A1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1930 
SymbolexbD1 
ID3692380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2345256 
End bp2345684 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID637732184 
Productbiopolymer ExbD/TolR family transporter 
Protein accessionYP_337082 
Protein GI76818116 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGA ACACCAGTTT CGGCGACGAC GACGATGACG GCCTGATGAA CGAGATCAAC 
ATGACGCCGC TCGTCGACGT CATGCTCGTA CTCCTGATCA TTTTCCTCGT GACGATCCCG
GCGATGCATC ATGCGGTGAA GATCGACCTG CCGCGCGCGA GCAGTCAGCC GGTCGAAGTG
AAGCCCAAGA CGATCGACGT CGCCATCGAA AGCGACGGCA CGGTTCTGTG GGACGACCAT
CCGGTGAGCG CGGCCGATCT GCAGGCGCGC ATCGCTCAAG CCGCGCAGAC GAACCCGCAG
CCCGAGCTGC ATCTGCGCGC GGATCGCAAG GTCGCGTACG AACGCGTCGC GGAAGTGATG
TCGGCGGCGC AGGCGGGCGG CCTGACGAAG CTCGGCTTCG TGACCGAGCC GAAATCGAAC
GCGAAGTAG
 
Protein sequence
MAMNTSFGDD DDDGLMNEIN MTPLVDVMLV LLIIFLVTIP AMHHAVKIDL PRASSQPVEV 
KPKTIDVAIE SDGTVLWDDH PVSAADLQAR IAQAAQTNPQ PELHLRADRK VAYERVAEVM
SAAQAGGLTK LGFVTEPKSN AK