Gene BURPS1710b_A1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1918 
SymbolbdhA-2 
ID3694147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2333070 
End bp2333858 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID637732172 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_337070 
Protein GI76819604 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.883979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCGA ACTTGAACGG GAAGGCGGCC ATCGTGACGG GCGCGGCGAG CGGCATCGGC 
AAGGAAATCG CGCTGGAGCT CGCGCGCGCG GGCGCGGCGG TGGCGATCGC CGATCTGAAC
CAGGACGGCG CGAACGCGGT GGCCGAGCTC ATCGAGCAGG CGGGCGGCCG GGCGATCGGC
GTGGCGATGG ACGTGACGAA CGAGGACGCG GTGAACGCCG GCATCGACAA GGTCGCCCAG
ACGTTCGGCT CGGTCGACAT TCTCGTGTCG AACGCGGGCA TCCAGATCGT CAATCCGATC
GAGAACTATG CGTTCGCCGA CTGGAAGAAG ATGCAGGCGA TTCACGTCGA CGGCGCGTTC
CTGACGACGA AGGCCGCGCT CAAGCACATG TACAAGGACG ATCGCGGCGG AGTGGTGATC
TACATGGGCT CGGTGCATTC GCACGAGGCG TCGCCGCTGA AGTCGGCGTA CGTGACGGCC
AAGCACGGGC TGCTGGGGCT TGCGCGCGTG CTGGCGAAGG AAGGCGCGAA GCACAACGTG
CGCTCGCATG TGGTGTGCCC GGGCTTCGTG CGCACGCCGC TCGTCGACAA GCAGATTCCG
GAGCAGGCCA AGGAGCTCGG CATCAGCGAA GAGGAGGTGG TGAAGAAGGT GATGCTCGGC
CAGACGGTGG ACGGCGTGTT CACGACGGTC GAGGACGTCG CGAAGACGGT GCTGTTCCTG
TCCGCGTTCC CGAGCGCGGC GCTCACCGGC CAGTCGTTCG TCGTCAGCCA CGGCTGGTTC
ATGCAGTAA
 
Protein sequence
MTSNLNGKAA IVTGAASGIG KEIALELARA GAAVAIADLN QDGANAVAEL IEQAGGRAIG 
VAMDVTNEDA VNAGIDKVAQ TFGSVDILVS NAGIQIVNPI ENYAFADWKK MQAIHVDGAF
LTTKAALKHM YKDDRGGVVI YMGSVHSHEA SPLKSAYVTA KHGLLGLARV LAKEGAKHNV
RSHVVCPGFV RTPLVDKQIP EQAKELGISE EEVVKKVMLG QTVDGVFTTV EDVAKTVLFL
SAFPSAALTG QSFVVSHGWF MQ