| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1903 |
|---|
| Symbol | |
|---|
| ID | 3692970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2319134 |
|---|
| End bp | 2319988 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637732157 |
|---|
| Product | putative ABC transport system, membrane protein |
|---|
| Protein accession | YP_337060 |
|---|
| Protein GI | 76819192 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | [TIGR03255] 2-aminoethylphosphonate ABC transport system, membrane component PhnV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.177419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTG ATTTCCCGGC TCGCGCCGCG CCGGTGCCGC GCCGCGAGCT GCGCTGGACC
GATGCGGCCT CGCGCGTCGC CTCGCGTGCG CTCGTCGCGC TCGCGGCCGC CGCCTGCTGC
TGGCTGTTCG TGCTGCCCGT CGTCGTCGTC GCGCTGTCGA GCGTCGCCGG GCACTGGTCG
GGCACGATCC TGCCGGCGGG CTACAGCCTG CGTTGGTTCG AGCGCCTCGG CCGGCCCGAA
TTCGACGCGC TCGCCGCGAG CCTCGAGATC GGGCTCGGCG TCGCCGCGCT CGGCACCGCG
CTCGGCGTCG CGCTGGCGCT CGCGCTCGAA GGCCGCACGC GGCGCGGCGT CGGTGCGCTC
GTCGACGCGC TCGTGATGCT GCCCAACGGC GTGCCGAGCG TCGTGCTCGG GCTCGCGGTG
CTGATCGCGT ATCACGCGAA GCCCGTCGAC CTGTCGAGCT CGCCCGCGAT CGTCGTGTTC
GTGCAGCTCG CGCTCGTGCT GCCGTTCTGC TACCGGTGCG CGGCCGCCGC GCTGCGCCCC
GAGCTGACCG TGCTGCGCGA GGCGGCCGCG AGCCTCGGCG CGCCGCCCGC GATGGTGCTG
CGCCGCGTGC TGCTGCCGCA GCTCGTGCCG GCGATCCGCG CGAGCCTCGC GCTCGGTTTC
GCGCTGTCGC TCGGCGAGCT CGGCGCGACG CTGACCGTCT ATCCGCCGGG CTTCGCGACC
GTGCCGATCG TCGTGATCGG CGCGGTCGAG CGCGGCTACT ACCTGCCCGC GTCGGCGCTG
TCGCTGCTGC TGCTCGGCGC GTCGCTCGTC GCGCTCATCG CGATCGCGGC GCGCGCGCCG
CGGCCGGCGC GATGA
|
|---|
| Protein sequence | MSADFPARAA PVPRRELRWT DAASRVASRA LVALAAAACC WLFVLPVVVV ALSSVAGHWS
GTILPAGYSL RWFERLGRPE FDALAASLEI GLGVAALGTA LGVALALALE GRTRRGVGAL
VDALVMLPNG VPSVVLGLAV LIAYHAKPVD LSSSPAIVVF VQLALVLPFC YRCAAAALRP
ELTVLREAAA SLGAPPAMVL RRVLLPQLVP AIRASLALGF ALSLGELGAT LTVYPPGFAT
VPIVVIGAVE RGYYLPASAL SLLLLGASLV ALIAIAARAP RPAR
|
|---|
| |