Gene BURPS1710b_A1901 details

Gene Information

• Locus tag: BURPS1710b_A1901
• Symbol: phnT
• ID: 3692300
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 2317206
• End bp: 2318219
• Gene Length: 1014 bp
• Protein Length: 337 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637732155
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_337058
• Protein GI: 76817468
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components
• TIGRFAM ID: [TIGR03258] 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.625994
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCATCG AGCATCTGAG CGTGCGCTAC GGCGCGCGCA CGGTGCTCGA CGATCTGTCG 
CTCGAGATCG GCGCGGGCGA GCTGCTCGCC GTGCTCGGCA AGAGCGGCTG CGGCAAGACG 
ACGTTGCTGC GCTTCATCGC CGGCTTCGTG AAGGCGGACG GCCTGACGGG CACGCTCGCC 
GTCGCCGGCC GCGACCTCAC GCACGCGCCG CCGCACAAGC GCAACCTCGG ATTGCTGTTC 
CAGAACTACG CGCTGTTCCC GCACCTGACG GTGTTCGAGA ACGTCGCGTT CGGGCTGCGC 
GCGCGGCGCA TGTCGTCCGC GGACATCGCG CGGCGCGTCG CCGACGTGCT CAAGCTCGTG 
CAGCTCGGCG ACGCCGGCCA TCACCTGCCC GCGCAACTGT CGGGCGGCAT GCAGCAGCGC 
GTCGCGCTCG CGCGCGCGCT CGTGATCGAG CCGGACGTGC TGCTGCTCGA CGAGCCGCTG 
TCCGCGCTCG ACGCGAACCT GCGCGCGTCG GTGCGCAGCG AGCTGAAGGC GCTGCACGAG 
CGGCTGCCGA ATCTGACCGT GGTCTGCGTG ACGCACGATC GCGACGACGC GCTCGTGCTC 
GCCGATCGCG CGCTGCTGAT GCGCGAGGGG CGCGTCGCGC AGCTCGGCAC GCCGCAGCAG 
TTGTACGACG CGCCCGCCGA CGGCTTCGTC GCGCGCTACC TGGGCGCGGC GAACCTGCTG 
CCGCCGAACG TCGTGTTCGC GTTCGGCGAT CCGCGCCACG ACGTGCGCGA CAAGGTTGCC 
TGCGTGCGGC CGGAGCGCCT CGCCGTGCGG CCGCTGGGCG AAGGGCGGCT GCACGGCACG 
ATCGCGTCGG TCGAATGGCA CGGCGCGGCG CTGTCGCTGA CCGTGATGCT CGACGCGGCG 
TGCGACGAGC CGGTGCTCGT CACGATGCAG CGCGGCCGGG GCCCGGCACC CGAGCGCGGC 
GCGCGCGTAT CGCTCGATTG CGAGGCGGAC GATGTCGTCC TTATCTCACC TTGA 

 

Protein sequence

MRIEHLSVRY GARTVLDDLS LEIGAGELLA VLGKSGCGKT TLLRFIAGFV KADGLTGTLA 
VAGRDLTHAP PHKRNLGLLF QNYALFPHLT VFENVAFGLR ARRMSSADIA RRVADVLKLV 
QLGDAGHHLP AQLSGGMQQR VALARALVIE PDVLLLDEPL SALDANLRAS VRSELKALHE 
RLPNLTVVCV THDRDDALVL ADRALLMREG RVAQLGTPQQ LYDAPADGFV ARYLGAANLL 
PPNVVFAFGD PRHDVRDKVA CVRPERLAVR PLGEGRLHGT IASVEWHGAA LSLTVMLDAA 
CDEPVLVTMQ RGRGPAPERG ARVSLDCEAD DVVLISP