Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1887 |
Symbol | |
ID | 3693986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2302640 |
End bp | 2303602 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637732141 |
Product | hydroxyproline-2-epimerase |
Protein accession | YP_337044 |
Protein GI | 76817590 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3938] Proline racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTT CCACCCTGGA TCGACGCGAC ATGAAGCACA TCCACATCAT CGATTCGCAC ACGGGCGGCG AACCCACGCG CGTCGTCGTG TCCGGCTTTC CGGCGCTCGG CGGCGGCACG ATGGCCGAGC GTCTGGCCGT GCTCGCGCGC GAGCACGACC GCTACCGCGC CGCCTGCATC CTCGAGCCGC GCGGCAGCGA CGTGCTCGTC GGCGCGCTGC TGTGCGAGCC CGTCTCGGCC GGCGCGGCGG CGGGCGTGAT CTTCTTCAAC AACGCGGGCT ATCTCGGCAT GTGCGGGCAC GGCACGATCG GCCTCGTGCG CACGCTGCAC CACATGGGGC GCATCGGGCC GGGCGTGCAT CGGATCGAGA CGCCGGTGGG CGACGTCGAG GCGACGCTGC ACGACGATCT GTCCGTGAGC GTGCGCAACG TGCTCGCGTA CCGGCACGCG AAGGACGTCG TTGTCGACGT GCCGGGGCAC GGCGCGGTGA CGGGCGACGT CGCGTGGGGC GGCAACTGGT TCTTCCTCGT GAGCGATCAC GGCCAGCGCG TCGCGGGCGA GAACGTCGCG GCGCTCGCCG CGTACGCGTC GGCGGTGCGC GCGGCGCTCG AGCGCGCGGG CGTGACGGGC CGCGACGGCG CGCCGATCGA TCACATCGAG CTGTTCGCCG ACGATCCCGA GTACGACAGC CGCAGCTTCG TGCTCTGCCC GGGCCACGCG TACGACCGCT CGCCGTGCGG CACCGGCACG AGCGCGAAGC TCGCGTGCCT CGCCGCCGAC GGCAAGCTCG CGGCGGGCGT GACGTGGCGG CAGGCGAGCG TGATCGGCAG CGTGTTCTCG GCGAGCTACG CGGCGGCCGA AGGCGGCGTC GTGCCGACGA TCCGCGGCAG CGCGCACCTG AGCGCGGAGG CGACGCTCGT GATCGAGGAC GACGATCCGT TCGGCTGGGG CATCGCATCG TGA
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Protein sequence | MRISTLDRRD MKHIHIIDSH TGGEPTRVVV SGFPALGGGT MAERLAVLAR EHDRYRAACI LEPRGSDVLV GALLCEPVSA GAAAGVIFFN NAGYLGMCGH GTIGLVRTLH HMGRIGPGVH RIETPVGDVE ATLHDDLSVS VRNVLAYRHA KDVVVDVPGH GAVTGDVAWG GNWFFLVSDH GQRVAGENVA ALAAYASAVR AALERAGVTG RDGAPIDHIE LFADDPEYDS RSFVLCPGHA YDRSPCGTGT SAKLACLAAD GKLAAGVTWR QASVIGSVFS ASYAAAEGGV VPTIRGSAHL SAEATLVIED DDPFGWGIAS
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