Gene BURPS1710b_A1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1872 
SymbolpdhR 
ID3692697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2286165 
End bp2287121 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content72% 
IMG OID637732126 
ProductGntR family transcriptional regulator 
Protein accessionYP_337029 
Protein GI76819096 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.345922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGAC GATCAGGGAA AACGCCGATC GGCCACCCGC CGATCACGCC GAAACCCGCG 
CCGGCATTGG CCCGGAAGGC CGTCCGCGGC GCGCCGGGTA TAATTGCGCG CGGCCGCGGC
ACGCCCCGGC ACGCCCCGGC ACGCCCCGGC ACGCCCCGGC GCGCGTCGGC CGAAGCGCGT
ACGAGCCGGC CGCGCGAGCC GGCGCCCGCG CCACCTAACC GTCCAGAAGG CCCGTGCATG
ACGTTTCAGC CTGTCGAGTC CTATACCCGC GTGCGCCTGT CCGACGTGGT GTCCGATCAG
ATCAAGTCGC TCATCTCGGC GGGCAAGCTG CTGCCCGGCC AGAAGCTGCC GACCGAGCGC
GAGCTCGCCG CGCAGCTGAA CGTGTCGCGC CCGTCGCTGC GCGAGGCGCT CGTGCGGCTC
GAGGCGGACG GCTTCATCGG CTCGGTCGGG CGCGGCGGCT TCGTCGTCTC GGACATCACG
GCGCCCGTCG TGTCCAGCCC GCTCGCCGAT CTGCTGCTGC AGAACCCCGA GGCGAGCCAC
GACGTGCTCG AGCTGCGCCA TGGCCTCGAG ACGATCTCGA CCGCGTACGC GGCCGAGCGC
GCGACGCCCG GCGATCTCGC GAAGATCAAG GAGGCATTCG ACACGCTCGC CGGCCACTCG
CTGAAGCACG AGCCGGGCCG GCTCGCCGAG GTCGACGCGA ACTTCCACCT CGCGATCGCC
GACGCGACGC ACAACGTCGC GCTGATCCAC GTGATGCACG GCATCCACGG GCTGCTGCAG
GAATCGATGC ACAAGTCGCA CCGGCTCGTG AACCACGCGG ACGCGATGGA GCGCGCGCTG
CTCGAGCAGC ACACCGAGAT CTACGAGGCG ATCGCCGCGA AGGACCCGGA ACGCGCGCGC
GCGGCGGCGG AGCGGCACCT GCGCTACGTG CGCGCGCTGT ACGAGCAGGC GGCCTGA
 
Protein sequence
MSRRSGKTPI GHPPITPKPA PALARKAVRG APGIIARGRG TPRHAPARPG TPRRASAEAR 
TSRPREPAPA PPNRPEGPCM TFQPVESYTR VRLSDVVSDQ IKSLISAGKL LPGQKLPTER
ELAAQLNVSR PSLREALVRL EADGFIGSVG RGGFVVSDIT APVVSSPLAD LLLQNPEASH
DVLELRHGLE TISTAYAAER ATPGDLAKIK EAFDTLAGHS LKHEPGRLAE VDANFHLAIA
DATHNVALIH VMHGIHGLLQ ESMHKSHRLV NHADAMERAL LEQHTEIYEA IAAKDPERAR
AAAERHLRYV RALYEQAA