| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1792 |
|---|
| Symbol | rbsC |
|---|
| ID | 3692929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2180850 |
|---|
| End bp | 2183357 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637732046 |
|---|
| Product | sugar ABC transporter, permease protein |
|---|
| Protein accession | YP_336949 |
|---|
| Protein GI | 76818994 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATGAGC AAAAGCTCAG TCACTCTCCG GGATACGACC GTGACTCCTG TTCTGCTCGA
AGCAAGCCAG GTGGCGAAGC GATTCAACGG CGTGAGCGCG TTGCGCGACG GACGCCTGAG
CCTTGCGGCC GGCCGCGTGC ATGCGCTGTG CGGCGGCAAC GGCACCGGAA AATCCACGTT
CCTGAACATC CTGATGGGGC TTTTGCGCCG CGACGAGGGC ACGATCCGGC TGAACGGCCG
CGATGTCGAT TTCGCGTCGC CCGCCGAAGC GCTCGCAAGC CGCATGGCGA TCATCACGCA
GGAGCTCTCG CCGGTGCCGG GGATGACGGT CGCCGAGAAC CTGTATCTTG GCCGCGAGCC
CACCCGCGCG GGCGTCGTCG TCGATTTCCG CGCGCTGAAG CGCCGCGCGC AGGCGCTGCT
CGACCGGCTC GGCTTCGCGA TCGACGCGGG CGCGCCGATG CATCGGCTGA GCCTCGCGCA
GACGCAGCTC GTCGAGATCG CGAAAGCGTT CAGCCACGAT TGCCAGGTGA TGATCATGGA
CGAGCCGACT TCCGCGATCG GCGAGCGCGA GACCGAGACG CTGTTCGCCG CGGTCCGCAA
CGTCACCGCG CACGGCGCGG GCATCATCTA CGTGTCGCAC CGGCTGAGCG AGCTATTCGA
CATCGCCGAC GACTACACGG TGTTTCGCGA CGGCGCGTAC GTCGAGAGCG GCCGCCTCGC
CGATATCGAC CGCGCGCATC TCGTGCGCGC GATCGTCGGC CGCGAGATGC CCGTCGTCGA
CAAGGCGCGC CGGCCCGCGC ACGGCGAGCC GTGCCTGAAG GTGGAGGGCC TCACGCGCGC
GAACGAGTTC GAGGACGTGA GCCTCGACGT GCGGCGCGGC GAGATTCTCG GCATCTATGG
GCTGATGGGC TCGGGCCGCA GCGAATTCCT CAATTGCGTG TATGGCTTGA CGCGCCCCGA
CGCGGGCGCC GCCACCCTCG GCGGCAAGCC GCTGCCGCAC GGCGAGCCCG CGCGGTCGAT
CCGCGCGGGC ATCGCGCTCG TCACCGAGGA CCGCAAGGAT TCGGGCCTCG TGCTCTGCGG
CAGCGTGCAG GAGAACATCG CGATGGCCGC GTACCGCCGC CTGTCGCGCG GCGGCGTGAT
CCGGCGCTCG CTCGTGCGGC GGCTCGCGCA GGCGATGGTC GAGCGGCTGC GGATCAAGGC
CGCTTCGCTG CGCATGCCGG TATCGGCGAT GAGCGGCGGC AACCAGCAGA AGGTCGTGCT
CGCGAAATGC CTGTCGACCG CGCCCGTGCT GCTGCTGTGC GACGAGCCGA CGCGCGGCAT
CGACGAAGGC GCGAAACAGG AGATCTACCG GCTGCTCGAT GCGTTCGCGC GCGACGGCGG
CGCGGTGATC GTCGTGTCGT CGGAGGCGCC CGAGCTGCTG TATCTGAGCG ACCGGATCGC
CGTGTTCAAG GGCGGCCGCG TCGCCGCCGT CCGCCCGGGC GACGGCGCCA CCCAGGAATC
CCTGCTCCAT CTCGCTTCAT GAACAAGACC ATGAACACTC AGACCCTGTC CCGTCTCGAC
GCGGCGCCCA GGCGCGTGAA CGTCGCGGAG CTCGCGAGCC GCTTCGGCAT CCCGATCGTC
TTCGTCGCGC TGTGCGTCGT GCTCGCGTTC GCGAGCCCGT ACTTCCTCAC CTGGCGCAAC
TGGAGCGACA TCCTGCGCCA GACGTCGATC AACGGCATTC TCGCGATCGG CATGACGTAC
GTGATCCTGA CCAAGGGCAT CGACCTGTCG GTGGGCTCGG TGCTCGCGCT CGCGGGCATC
GTGAGCGGCC TCGCCGGCGC GGCGGGGCAC GGGCTCGCGG TGTCGCTCGC GGCCGGCGTC
GCGTGCGGCG CGGCGCTCGG CGCGATCAAC GGCGTGGCGA TCGCGCGCTT GAACGTGCCG
CCGTTCGTCG CGACGCTCGG CATGCTGAGC GTCGCGCGCG GCGTCACGTA CATCGCCAAC
GACGGCAGCC CGGTCGCGAA CCTGCCCGAC GATTACCTGT CGCTCGGCAT CGGCAGGCTC
GGCCCGCTCG GGATGCCGGT GCTGATCTTC GCGGGCGTCG CGCTCGCGTG CTGGTGGGTG
CTGCGCTACA CGACATACGG CCGCTATCTG TATGCGGTCG GCGGCAACGA GAAGAGTGCG
CGCACGTCGG GCATCGGCGT GCGCAAGGTC GTGTTCTCGG TGTACGTCGT CTCGGGCGCG
CTCGCCGGCC TCGCGGGGAT GATCCTCGCC GCGCGCACGA CGTCCGCGCT GCCGCAGGCG
GGCGTGTCGT ACGAGCTCGA CGCGATCGCG GCCGTCGTGA TCGGCGGCAC GAGCCTGTCG
GGCGGGCAGG GCGGCGTCGT CGGCACGCTG TTCGGCGCGT TGTTGATCGG CGTGATCAAC
AACGGGCTGA ACCTGCTCGG CGTGTCGTCG TATTACCAGC AGATCGCGAA GGGACTCATC
ATCGTGCTGG CCGTGCTCAT CGACGTGGCC CGCAAACAGC AGCGCTGA
|
|---|
| Protein sequence | MNEQKLSHSP GYDRDSCSAR SKPGGEAIQR RERVARRTPE PCGRPRACAV RRQRHRKIHV
PEHPDGAFAP RRGHDPAERP RCRFRVARRS ARKPHGDHHA GALAGAGDDG RREPVSWPRA
HPRGRRRRFP RAEAPRAGAA RPARLRDRRG RADASAEPRA DAARRDRESV QPRLPGDDHG
RADFRDRRAR DRDAVRRGPQ RHRARRGHHL RVAPAERAIR HRRRLHGVSR RRVRRERPPR
RYRPRASRAR DRRPRDARRR QGAPARARRA VPEGGGPHAR ERVRGREPRR AARRDSRHLW
ADGLGPQRIP QLRVWLDAPR RGRRHPRRQA AAARRARAVD PRGHRARHRG PQGFGPRALR
QRAGEHRDGR VPPPVARRRD PALARAAARA GDGRAAADQG RFAAHAGIGD ERRQPAEGRA
REMPVDRARA AAVRRADARH RRRRETGDLP AARCVRARRR RGDRRVVGGA RAAVSERPDR
RVQGRPRRRR PPGRRRHPGI PAPSRFMNKT MNTQTLSRLD AAPRRVNVAE LASRFGIPIV
FVALCVVLAF ASPYFLTWRN WSDILRQTSI NGILAIGMTY VILTKGIDLS VGSVLALAGI
VSGLAGAAGH GLAVSLAAGV ACGAALGAIN GVAIARLNVP PFVATLGMLS VARGVTYIAN
DGSPVANLPD DYLSLGIGRL GPLGMPVLIF AGVALACWWV LRYTTYGRYL YAVGGNEKSA
RTSGIGVRKV VFSVYVVSGA LAGLAGMILA ARTTSALPQA GVSYELDAIA AVVIGGTSLS
GGQGGVVGTL FGALLIGVIN NGLNLLGVSS YYQQIAKGLI IVLAVLIDVA RKQQR
|
|---|
| |