Gene BURPS1710b_A1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1790 
Symbol 
ID3694376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2179124 
End bp2180143 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID637732044 
ProductPTS system, mannitol-specific IIBC component 
Protein accessionYP_336947 
Protein GI76817903 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCA CCGCGGTTCA TGACGCCGCG CGGCGCGCCG CTCCACTCGA TCACGACATG 
ACGAACGAAG AACTCACGCA ACTCGCGAAG TGCTATTACG TCGACGGGTT GACGCAGGAA
GAACTCGCGC AGAAGTTCGC GATCTCGCGC CCGAAGGTGG GCCGGCTGCT CAAGCGCGCG
ATCGAAGAGG GCATCGTCGA GATTCGCGTG CGCCATCATC CGCGCGCGGT ACAGGATCTC
GAACAGGAAC TGGTCACGCG CTTCGGCATC CAGCGCGCGA TCATCTCGGT CGACCACAAG
GATCAGGACA GCCAGCGCGA GCTGCTCGCG GGGCTCGTCG CGAGCTACCT CGACCGCGTG
CTCGCGGACG GGGCGATCGT CGCGGTCGGC ATGGGCCGCA ACGTGAGCGC GGTGTCGCGG
CACGCGGTAT CGACGACGCA GCGCAACTGC TCGTTCGTTT CCGCGATCGG CGGCTCGTAT
CGCGGCGGCG AGACGATGAA CGCCGACCAC ATCTGCCGGC GCCTCGCCGC GCGCTTCGGC
GGCGAGAGCG AGACGCTGTA CGCGCCGGCG CTCGTCAATG ATCCGCAGCT CTTCACCGCG
CTGCTCGAGA ACGACGTCGT GCGCCAGTCG CTCGACAAGG CGCGCCGCGC GTCGATCGCG
CTCGTCGGCA TCGGCGACAT TCTCGAGGAC AGCAACATGG TCCGCATGGG CTGGTTCACG
CCCGAGGAAA TGGCCGAGGC AAAGCGCGCG GGCGCCGTCG GCGACATCAT GGGCTACGAC
TTCATCGACA TCCACGGCCG CCCGGCGACG ACGATGCTGC ACGGCCGCGT GATCGGGCTC
ACGCTCGAAG ACCTGAAGCG GATTCCGAAC GTGATCGCGA CCGCGAGCGA GCCGACGAAA
GCCACGGGCA TTCTCGGCGC GCTGCGCGCC GGCGTGATCA ACACGCTCGC GACCACGCAG
TCGATCGCGC AGACGGTGCT GAGCCTCGCG CAGGCCACCG AGACGGCGAG CGCGGCGTAG
 
Protein sequence
MTRTAVHDAA RRAAPLDHDM TNEELTQLAK CYYVDGLTQE ELAQKFAISR PKVGRLLKRA 
IEEGIVEIRV RHHPRAVQDL EQELVTRFGI QRAIISVDHK DQDSQRELLA GLVASYLDRV
LADGAIVAVG MGRNVSAVSR HAVSTTQRNC SFVSAIGGSY RGGETMNADH ICRRLAARFG
GESETLYAPA LVNDPQLFTA LLENDVVRQS LDKARRASIA LVGIGDILED SNMVRMGWFT
PEEMAEAKRA GAVGDIMGYD FIDIHGRPAT TMLHGRVIGL TLEDLKRIPN VIATASEPTK
ATGILGALRA GVINTLATTQ SIAQTVLSLA QATETASAA