Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1789 |
Symbol | |
ID | 3692644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2177869 |
End bp | 2179068 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637732043 |
Product | outer membrane porin |
Protein accession | YP_336946 |
Protein GI | 76818828 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGG GGGCAGCAGC ATGGTTGGTG GCGGGGAGCA TGTGCGCCGG CGCGCACGCG CAAGGCACGG TGACGCTCTA CGGGATCGTC GACGCGGGGC TCGGCTATAC GAGCGAGCAG CGCGTCGCGC AGACCAAGGG GGCGCTCGGC TCGCCCGTCG GCTACCGCAA TGAGTCGAGC TACGGCTTCG CGAGCGGCAT CTGGTCGGGC AGCCGCTGGG GGCTGAAGGG CAAGGAGGAG CTGGGCGGCG GTCTCGCAGC CGTGTTCCAG CTCGAGAACG GCTTTAACAT CGGCACCGGA CAGGCGGGAC AGGGCGGGCG AATGTTCGGC CGGCAGGCGT GGATGGGGCT GTCGAGCGAA CGCTACGGGA CGCTCACGAT GGGGCGCCAG TACGATCCGA TCGTCGACTT CGTCGGCACG ATCGGCGCGG GCGCGTTCCT GACCGGCATG GGCGCGCATC CGGGCGATCT CGACAACATC GACAATCAGG CGCGCGAGAA CAACTCGATC AAGTACGTGA GCCCGAAGTT CGGCGGCCTC GCGCTCGGCG CGCTGTACGG CTTCGGCAAT CAGGCGGGCA GCGTGAAGAA CCAGAACACG TGGAGCGTGG GCGGCCAGTA TGTGAACGGG CCGTTCTCGC TCGGCGCCGC GTACCTGTAT GCGACGAACG CGTACGGCGC GAACGGCGGC GCGTGGACGG GTTCGTACGA CGGCACGTTC GCTTCGTCGA TCAACGAAGG CTTCGCATCG GCGAAGAGCA TGCAGATCGT CGCGGCGGCG AGCACCTATC AGATCGGCGC GGTGACGCTC GGCCTGTCTT ACAGCAACAC GCGGTACAAA TCCGGCGCGT TCTCGACGTT CAACGGCACC GCGACGTACA ACTCGATCGG CGGCACCGTA TCGTGGCAGG CGACGCCCGA GCTGCGCGTC GCGGCGGGCT ATGATTTCAC GCGTGGCAGC TCGATCGACG GTCAGTCCGC GCCGAAATAC CATCAGGTGA ACTTCGCGTC GTACTACTAC CTGTCCAAGC GCACCGCGCT GTATGGCCTC GTCGATTATC AGAAGGCGAG CGGCAAGACG CTCGATGCGT ACGGCAACGT CGTCGCGGCG ACGGCGTCGG TCGGCGACGT CGGCAACGGC ATTTCGTCGG CGGGCGATAC GCAGACGCTC GTGCGCATCG GCGTGCGTCA CACGTTCTGA
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Protein sequence | MKKGAAAWLV AGSMCAGAHA QGTVTLYGIV DAGLGYTSEQ RVAQTKGALG SPVGYRNESS YGFASGIWSG SRWGLKGKEE LGGGLAAVFQ LENGFNIGTG QAGQGGRMFG RQAWMGLSSE RYGTLTMGRQ YDPIVDFVGT IGAGAFLTGM GAHPGDLDNI DNQARENNSI KYVSPKFGGL ALGALYGFGN QAGSVKNQNT WSVGGQYVNG PFSLGAAYLY ATNAYGANGG AWTGSYDGTF ASSINEGFAS AKSMQIVAAA STYQIGAVTL GLSYSNTRYK SGAFSTFNGT ATYNSIGGTV SWQATPELRV AAGYDFTRGS SIDGQSAPKY HQVNFASYYY LSKRTALYGL VDYQKASGKT LDAYGNVVAA TASVGDVGNG ISSAGDTQTL VRIGVRHTF
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