| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1787 |
|---|
| Symbol | |
|---|
| ID | 3694077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2176449 |
|---|
| End bp | 2177276 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637732041 |
|---|
| Product | putative ABC transport system, membrane protein |
|---|
| Protein accession | YP_336944 |
|---|
| Protein GI | 76817642 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACGAT CGTTCCTCGA ACGCAGCCTG TTGCGCCGCT TCGGCGCGGC GCCGGCGGGC
GGGCTGCTCG CGCTTTTCTT CGTGCTGCCG CTCGCCGCGC TCGTGAGCGC GGCGTTCGCG
GAGGGCGGCC GCGCGTTCGC CGCCGTGCTG CACGATCCGC TCGTCGGCGA CGCGATCGGC
CGCTCGCTCG CGCTCGCGGT CGGCACGGGC ACGCTGTCGA CGTGCGTCGG CGTGCCGCTT
GCGCTGTCGT TCGCCGAACA GCCACCCGCG CGGCGCCGTT GGTTGCTCGC GCTGCTCGGC
GTGCCGCTCG CGTTTTCCGG GCTCGTGATC GCGTACGGCT TCATCCTGAC GTTCGGTCGC
GCGGGTTTCG TCACGACACT GCTCGCCGGC TTAGGCGCGG ATGCGGCGAA GGTCGGCGGC
GTGATCTACA CGACGTTTGG CCTCGTCGTC GCATATGCGT ACTACCTGAT TCCGCGCGTC
GCGCTGATGC TGTTTCCGGC GTTCGCGAAC CTCGAGCGCA GGCCGCTCGA AGCGGCGATG
TCGCTCGGCG CGAAGCCGTG GCGCGCGTGG CTCGATGTCG CATGGCGCGA GCTGTGGCCG
TCGGTCATGG CCGCGTGGTG CCTCGTCACG GCGATCGCGC TCGGCACGTA CGGCACCGCG
CTCGCGCTCG CCGGCACGCA GATCAACATC CTGCCGCTGC TGATGTACCT GAAGCTGTCC
GACGGGCAGA CCGATTTTTC TCAGGCCGCC GTGCTGTCGA TCGTGTTGAC GGCGCTGTGC
ACATGCGTGC TCGCGATGGG GGAATACGTT GGGCGACGAC ATCGCTGA
|
|---|
| Protein sequence | MQRSFLERSL LRRFGAAPAG GLLALFFVLP LAALVSAAFA EGGRAFAAVL HDPLVGDAIG
RSLALAVGTG TLSTCVGVPL ALSFAEQPPA RRRWLLALLG VPLAFSGLVI AYGFILTFGR
AGFVTTLLAG LGADAAKVGG VIYTTFGLVV AYAYYLIPRV ALMLFPAFAN LERRPLEAAM
SLGAKPWRAW LDVAWRELWP SVMAAWCLVT AIALGTYGTA LALAGTQINI LPLLMYLKLS
DGQTDFSQAA VLSIVLTALC TCVLAMGEYV GRRHR
|
|---|
| |