| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1783 |
|---|
| Symbol | |
|---|
| ID | 3692908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 2172364 |
|---|
| End bp | 2173260 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637732037 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_336940 |
|---|
| Protein GI | 76817491 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATC TGTATCCGAA CGTCGCCGAA CTGCACGCGT TCGCCAGTTC TGCGAAGCAT
CTGAACTTTT CGTATGCGGC GCGCGAGCTC GGCCTCACGC CGAGCGCGGT CAGCCGGCAG
ATCGCGAGCC TCGAGGCGCT GCTCGGCGTG AAGCTGTTCG TGCGCGAAGG CCGCAATCTC
GCGCTCACGC GCGCGGGGCA GGTCTATCAG GCGCGCGTCG CGGGGCCCCT GCGCGAGATC
GGCAATGCGT CGCTCGAATT GCTGAGCGCG CGCGAGGACA GCAATCTGCT GACCATTGCG
AGCGTGCCGA CCTTCACGAC GAAATGGCTC GTGCCGCGCC TGCCGCGCTT TCTCGAAACC
GCGCCTGACA TCACGCTGAG CTTCCGGCGC CACCTCGCGC CGGGCGACCT GTTCCCGCTC
GGGCTCGATG CGGCGATCCG CTACGGCGAC GGCCGCTGGG AAGGCGTCCA GTGCGACTAT
CTCGACGGCC GCACGTTCGT GCCCGTATGC GCGCCCGGTT TCGCCGAGCG TCACGCCCTG
CGCGAACCCG CGGACATCGC CGCCGCGCCG CGCCTCGTGC ACGAGCAGGC CGAATGCGCG
TGGCTCGCGT GGGCGGACCG GCACCGCGCC ACGCAGATGA ACGCGCTCGC CGGCCCACGC
TTCGAGCAGT ACTCGGTGCT GATCCAGGCG GCGCAGGCAG GGCTCGGGAT CGCGCTCATT
CCCGCGTTCC TGATTCGCGC GCCGCTCGCG GCCGGCACGC TCGTGCAGCC GCTCGACGCG
CCCGTCGACG TCGACGAGCA GAGCCATTAC CTGTGCTACG CGCCGGAGCG GCTGCAGGCG
AGTGCATCGC TGCGGCTGCT GCGCGAATGG ATGCTCGCCG AGTGCACATG CGCATGA
|
|---|
| Protein sequence | MKHLYPNVAE LHAFASSAKH LNFSYAAREL GLTPSAVSRQ IASLEALLGV KLFVREGRNL
ALTRAGQVYQ ARVAGPLREI GNASLELLSA REDSNLLTIA SVPTFTTKWL VPRLPRFLET
APDITLSFRR HLAPGDLFPL GLDAAIRYGD GRWEGVQCDY LDGRTFVPVC APGFAERHAL
REPADIAAAP RLVHEQAECA WLAWADRHRA TQMNALAGPR FEQYSVLIQA AQAGLGIALI
PAFLIRAPLA AGTLVQPLDA PVDVDEQSHY LCYAPERLQA SASLRLLREW MLAECTCA
|
|---|
| |