| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1758 |
|---|
| Symbol | |
|---|
| ID | 3692008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2145812 |
|---|
| End bp | 2149858 |
|---|
| Gene Length | 4047 bp |
|---|
| Protein Length | 1348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637732012 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_336915 |
|---|
| Protein GI | 76817706 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.347198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGTC GCGAAACGCG CAGCGCCTAT ACTGGCGAAA GCCGGACGCT CCCGTCCCGA
TTTCCTCGCT GCCGTTCCGA CGGCGATTCA GTAATGGCAT TCAACAAAGA AACCGTCCAA
TCGAACTTGC AAAAGCTCGG CGTCGCGGCC CGTTCGCGCC GCGCGAAGCG CGCCGGCATC
GGCGCGCTGA TCTTCCTCGT GGCGTTCGGG CTGCTCGGCT TTTTCGCCGC GCCGCCGCTG
ATCCGGCACG TCGCCGAGCA GCAACTGAGC CAGCAGCTCG AGCGTCCCGC GACGATCGCG
CGCATCGCAT TCAATCCCTA CACGCTGCGG CTCGAGGCCG ACGGCGTGCG CGTCGGCGAG
CGCGGCGGGC AGGGCGCGTT CGTCGACATC GGCAAGCTCG TCGTGCGCGC GTCGTGGACG
TCGCTCGCGC GCTTCGCGCC GATCATCGAC GAAGTGCGGC TCGATCAGCC GCGCTTCAGG
ATCGTGCGCT ACGACGCGCA GCGCTTCAAT TTCACCGATC TGGTCGACAA GTTCTCGAAG
CCTTCGCCGC AGCCGTCGGC GAAGCCGGCG CGCTTTTCGG TGTCGAACAT TCAGGTCAAC
GACGGCCGCA TCGAGTTCGA CGACCGGTTG CTGAACGCGA GGCACGTCGT CGATCAATGG
ACGGTCGGCA TTCCGTTCAT CGCGACGCTG CCGTCGAAGA CCGACATCTT CGTCGAGCCG
AAGCTGCGCG CGCGCCTCGA CGGCAGCCCG ATCGCGATCG ACGGCAAGAC GAAGCCGTTC
GCGCAGTCGC GCGAATCGTC GATCAACCTG AAGTTCGACG GGCTCGACGT GCCGCGCCTG
CTGTCGTACG CGCCGACGAA GCTGCCCGTC GACGTGCGCT CGGGCCGGCT CTCGAGCAAC
CTCGACGTGA ATTTCGCGAT GGCGGGCGAC ACGCCCTCGC TGCGCGTGTC GGGCACTCTC
GACCTGAACG ACGCGCAGGT GACGAGCCGC GCGAACGAGC CGCTCTTCGC CGCGCACGCG
GTGCACGTCG CGGCCGCGCA GCTCGAGCCG CTGCGCAACG TGCTGCATTT CGACGACATC
CGGATCGACC GGCCGGTCGT ATCGCTCGCG CGCGACAAGG CGGGCGTGCT GAACGTGATG
AAGCTCGCGG GCGGCGAGAA GGCAGGCGCG CCGCCCGCGG CGCGCGCCGC CGCGCCGACA
TCGGCCGGGG CGAGCGCCGC CGCGGCGGGT TCATCGGTGT CAGCTGTTTC GCCCGGCTCG
CCCGCCGCGG CGCGTCCCGC ATCCGGCGCG GCTTCGCAGC CGGCCGCCGC CGCGTCGAGC
GCCGCCGCCG CGCACGCGGC CGCCGAGAAG GCGCCGCCGC TCGACCTGAC GATCAAGCGC
TTCGCGATCA ACGACGGCGC GCTGAATCTG AACGACGCAT CGCTCGCGAC GCCCGCCGCG
ATTTCGCTCC AGCATGTCGC GACGACGCTC GCCGATTTCA CGCTCGCCGG CAAGACGCCC
GCGCGCTACA CGCTCGCGGC CGACGTCGCG AGCGGCGGCT CGCTGAAGGC CGAGGGCGCG
TTCAGCCTCG CCGCGCGGCA AGCGGACACG AAGCTCGCCA TCGATGCGCT CGCGTTGCCC
GCGGTGCAGC CGTATCTTGC CGGCGCGAGC TCCGCGCGCG TGCTCGACGG CGTGCTCAGC
ACGTCGGTGA ACGCGAAGGC GGACTGGTCG AAGACGCCGC TCGACGCGCA GGTGAGCGAC
AGCGAGCTCG GCCTGAAATC GCTGAAGATC GCGCTGCCGA ACGCGAAAAC GCCGGCTGTC
GCGCTGCCCG ACGCGCGCGT GAAGGTGACG AAGATCGATC TCGCCGCGCG CACCGCCGAG
ATCGCGAGCG TCGATGCGAC GGGTCTCGCG CTCGACGTCG CGCGGCTGCA GGACGGCCGG
ATCGATCTCG CGTCGCTCGC GGGCGACGGC GGCCGGGCGG CGGGCGCGAA GCCGGCCGCG
TCGAACGCGT CGGCCGCGCG CGGCGCGCGG CCCGCCGCGC CCGCATGGCG CTACCGGATC
GACGAACTGA ACGTGAAGGA CGCGAAGGCG AACTTCACCG ACCGCTCGAC GCCGCGCCCC
GTGAAGCTCG CGATCGCGCC GCTCGCGCTG AACGTCCGGC AGATCAGCGA GGATCTGTCC
AAGCCGTTGC CCGTCAGGCT GACGGCCACG CTCAACCGCA AGGGCTCGCT CGAGCTGTCG
GGCAACGTGA CGGCGCAGCC GCTGAAGGTC GGCCTGAAGC TGAACGGCAA CCGGCTCGAC
GCGGCCGCGT TCGAGCCGTA TTTCGGCAGC ATGCTGAACG CGACGGTCGC GAGCGCGCTG
CTGAACGCGA AGGGCGAGCT GAGCGTCGAG CAGGCGAAGC AGTCGACGAA GGCGTCGTAT
CGCGGCGACG CGGCGCTCGT CGATGTGCGG ATGCTCGACA AGGCGACGTC CGATCCGTTC
GCCGGCTGGC GCTCGCTCGC GCTCGCGAAC CTGAAGGCGA GCTATGACGA CGCGCGCGGC
ACCGACGTCG ACGCGTCGCG CGTGACGTTC TCGAATTTCT ACGGCCGCGT GCTGCTCGAC
GCGCAAGGCA AGCTGAACCT GCGCGAGGTC GTCGCCAAGG AGAGCGGCCC CGCGCAGTCG
CTCACGCGCG ATGCGAGCGG CAAGGAGCCG ATCCCGCTCA CGCCTCAGGC CGCGTCGCAG
GCGAAGGCGG CGATCGCGGC GTCGGCGGTC GAGCCGGCTT CGGCGCCCGT GCTCGCGTCG
GCGGCGGCGG CATCGGCGGC GGCGGGCGCG TCGGCCGTCG CGGCATCGCC CGCGTCGGGC
GCGGCCGTCG TGCGCGCGGC CGCGCCGCCG CAGCATCCGG TGCGGCTGCA CTTCGGCCAG
TTGCTGCTGC AACGCGGCCG CGTCACGTAC ACCGATAACT TCATCAAGCC GAACTACACG
GCGAACCTCG TCGCGATCAA CGGCACGATC GGCGCGTTCG GCACCGATTC GACGGCGCCC
GCGCCCGTCG ATGTCGGCGC GAACCTCGCC GGCAACGGCC CGATCACGAT CAAGGGAACG
GTGAACCCGC TGATCGAGAA GCCGTCGCTC GACCTGACCG CGACCGCGCA CGACATCGAG
CTCACGAACC TCACGCCGTA TTCGGCGAAG TACGCGGGCT ATCCGATCAC CAAGGGCAAG
CTGAACGTCG ATCTGCACTA CAAGCTCGAC AACGATCTGC TGAGCGCGAA CAACCACATC
TTCATCGATC AGCTCACGTT CGGCGAGCAC GTCGAGAACG ACACCGCGAC GAAGCTGCCG
GTGCGGCTCG CGATCGCGCT CCTGAAGAAC TCGCGCGGCG AGATCGACGT GAACGTGCCG
GTGTCCGGTT CGTTGTCGAA CCCGGAGTTC AGCATTGGCG GGCTGATCTG GCGCGCGGTG
CTGAACCTGA TCGCGAAGGC CGTCACCTCG CCGTTCACGC TGCTCGCGCA CGCGTTCGGC
GGCGACGGCG AGGCGCTCGG CTATGTCGAA TTCGAGCCGG GCCGCTCGAA GCTGTCCGAC
GCGTCGCAGA AGAAGCTCGA CACGATCTCG AAGATGCTCG CGGAAAAGCC CTCGATCCGC
CTCGACCTGA TCGGCCGCGT CGATCCGGAC AAGGATCTGC CGGGGCTGCG CGACGCGTAC
GTCGAGCGGC TCGTGCGGCA GCAGAAGCTG AAGGACGTGG TCGGCCAGGG CGAGAGCGTC
GACCCGATGA CGGTGAAGGT CGATCCCGCC GAATATACGA AGTACCTGAC GAAGGCGTAC
AAGGCGGCCG ATTTCAAGAA GCCGCGCAAC ATGATCGGCT TCACGAAGAC GTTGCCCGAC
GACGACATGA GAAAGGCGCT CGCCGATCAC GCGAGCGTGG ACGACTCGAG CCTGCGCGCG
CTCGCTCAGG CGCGCGCGCA GGCGGTGCGC CAGTACCTGG AGGGCAAGGT CGATTCGAGC
CGGATGTTCA TCGTCGCGCC GAAGCTCGAC GCGAAGGGCA TCGAGGACAA GGGCGCGACG
ACGCGCGTCG ACTTCGGCCT GAAGTGA
|
|---|
| Protein sequence | MLRRETRSAY TGESRTLPSR FPRCRSDGDS VMAFNKETVQ SNLQKLGVAA RSRRAKRAGI
GALIFLVAFG LLGFFAAPPL IRHVAEQQLS QQLERPATIA RIAFNPYTLR LEADGVRVGE
RGGQGAFVDI GKLVVRASWT SLARFAPIID EVRLDQPRFR IVRYDAQRFN FTDLVDKFSK
PSPQPSAKPA RFSVSNIQVN DGRIEFDDRL LNARHVVDQW TVGIPFIATL PSKTDIFVEP
KLRARLDGSP IAIDGKTKPF AQSRESSINL KFDGLDVPRL LSYAPTKLPV DVRSGRLSSN
LDVNFAMAGD TPSLRVSGTL DLNDAQVTSR ANEPLFAAHA VHVAAAQLEP LRNVLHFDDI
RIDRPVVSLA RDKAGVLNVM KLAGGEKAGA PPAARAAAPT SAGASAAAAG SSVSAVSPGS
PAAARPASGA ASQPAAAASS AAAAHAAAEK APPLDLTIKR FAINDGALNL NDASLATPAA
ISLQHVATTL ADFTLAGKTP ARYTLAADVA SGGSLKAEGA FSLAARQADT KLAIDALALP
AVQPYLAGAS SARVLDGVLS TSVNAKADWS KTPLDAQVSD SELGLKSLKI ALPNAKTPAV
ALPDARVKVT KIDLAARTAE IASVDATGLA LDVARLQDGR IDLASLAGDG GRAAGAKPAA
SNASAARGAR PAAPAWRYRI DELNVKDAKA NFTDRSTPRP VKLAIAPLAL NVRQISEDLS
KPLPVRLTAT LNRKGSLELS GNVTAQPLKV GLKLNGNRLD AAAFEPYFGS MLNATVASAL
LNAKGELSVE QAKQSTKASY RGDAALVDVR MLDKATSDPF AGWRSLALAN LKASYDDARG
TDVDASRVTF SNFYGRVLLD AQGKLNLREV VAKESGPAQS LTRDASGKEP IPLTPQAASQ
AKAAIAASAV EPASAPVLAS AAAASAAAGA SAVAASPASG AAVVRAAAPP QHPVRLHFGQ
LLLQRGRVTY TDNFIKPNYT ANLVAINGTI GAFGTDSTAP APVDVGANLA GNGPITIKGT
VNPLIEKPSL DLTATAHDIE LTNLTPYSAK YAGYPITKGK LNVDLHYKLD NDLLSANNHI
FIDQLTFGEH VENDTATKLP VRLAIALLKN SRGEIDVNVP VSGSLSNPEF SIGGLIWRAV
LNLIAKAVTS PFTLLAHAFG GDGEALGYVE FEPGRSKLSD ASQKKLDTIS KMLAEKPSIR
LDLIGRVDPD KDLPGLRDAY VERLVRQQKL KDVVGQGESV DPMTVKVDPA EYTKYLTKAY
KAADFKKPRN MIGFTKTLPD DDMRKALADH ASVDDSSLRA LAQARAQAVR QYLEGKVDSS
RMFIVAPKLD AKGIEDKGAT TRVDFGLK
|
|---|
| |