Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1701 |
Symbol | |
ID | 3692450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2077675 |
End bp | 2078760 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637731955 |
Product | SciB protein |
Protein accession | YP_336858 |
Protein GI | 76819180 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCG ACATGACGCA GGCGGCCGTT GCCGACACGG CGCTGTCGCC GCAAGCGCTC GCGCGGCTGC GCGCCGAACC GTGGCGCTAT GGGTTCCTCG CGCTGCTGCG CCGCATCGGC GCGGACGCGC GCATCGATCC GATCGGCAAG GCGAGGCGCC CGCAGGCGGA GCCGTTTCGC CTCGGCCAGC AGCCGAGCCT CGCGTTCGCG CCGCGCGAGA TCGCCAGCGT CGGCGACGCG AACGGGCGGC TCAAGGTGCG GCTGTTCGGG CTCGGGATGC TGGGGCCGAA CGGGCCGCTG CCGATCCACG TGACGGAGAT CGCGCGCGAT CGCGAGGAGA GCCGGCGCGA TCCGACGCTC GGCAATTTTC TCGATATCTT CCATCATCGC TATCTGACGC TGCTGTATCG CGCGTGGGCG TCGGCGCAGG CGGCGGCCGG CCTCGATCGT CCGGATGACG AACGGTTTTC GTTCTACGTC GCGAGCCTCG CCGGCCAGGA TCTCGACGAG GTCGGCGCGC GGCCGCTGCC CGCGCACGCG CGGCTGTCCG CCTCGCCGCA TCTGGTGCGC GAGGCGCGCA ACGCGGACGG CCTGCGAATG ACGCTCGAAC GTTACTTCGG CGTGCCGGTG ACGCTGGAGG AAAACGTATT TCACTGGATC GCCGTCGATC CGCTCGAGCA CAGCCGGCTC GGCCGGCCCG GCGACGCATC GACGATGGCT GCGGGCGCGC TGCTCGGCGA GCTGGTGCCG GATCGGCAGC ACAAGTTCCG GCTCGTGTTC GGGCCGCTCG ACATCGACGC CTATCTGCGC TTCACGCCGC GGGGCGAGGA TCTGCCGCGG CTCGTCGAAT GGGTGCGGGC GTTCGTCGGC TACGAGTTCG AGTGGGAGCT CGAGTTGCGG ATCAAGCCGA ACGGCGCGCC GCCCGCCGTG ATGGGCGGCC CGCATCAACT CGGCTGGTCG GGCTGGCTCG GCCGCTCGCC GTCCGGCGAG CCGGTGACGG GCATGCGTTT CGAACCCGAG CACTATGCGC ACGGGTTCGC GCGCGGCACG GCTCGCGACA CGCGCGGCAT GCGAGGTGAA CGATGA
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Protein sequence | MARDMTQAAV ADTALSPQAL ARLRAEPWRY GFLALLRRIG ADARIDPIGK ARRPQAEPFR LGQQPSLAFA PREIASVGDA NGRLKVRLFG LGMLGPNGPL PIHVTEIARD REESRRDPTL GNFLDIFHHR YLTLLYRAWA SAQAAAGLDR PDDERFSFYV ASLAGQDLDE VGARPLPAHA RLSASPHLVR EARNADGLRM TLERYFGVPV TLEENVFHWI AVDPLEHSRL GRPGDASTMA AGALLGELVP DRQHKFRLVF GPLDIDAYLR FTPRGEDLPR LVEWVRAFVG YEFEWELELR IKPNGAPPAV MGGPHQLGWS GWLGRSPSGE PVTGMRFEPE HYAHGFARGT ARDTRGMRGE R
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