Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1700 |
Symbol | |
ID | 3692084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2075786 |
End bp | 2077675 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637731954 |
Product | SciC protein |
Protein accession | YP_336857 |
Protein GI | 76819516 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACCCGC AATTGCTCGA CTACTACAAC CAGGAACTGA TCTACATGCG CGAGCTCGGC GCCGAGTTCG CGCGCGCGCA CCCGAAGATT GCGCGGCGCC TCGGAATGCA GGCGGGCGAA GTGGCCGATC CGTACGTCGA GCGGCTGATC GAATCGTTCT GCTTCATGGC CGCGCGCATG CAGATCAAGC TCGATGCGGA ATTTCCGCGC TTCACCGGCC GCCTGCTCGA GGTGCTCTAT CCGACCTATG TCGCGCCGAC GCCGTCGATG GCGGTCGCGC GCCTGTACCC GAGCCGCACC GAAGGCAATC TCGCGCAAGG CTTTCGCGTC GCGCGCGGCA CCGCGTTTGC CGCGCGCGTG CCGGCCGGCG AGAAAACCGC GTGCCGGTTT CGCAGCGGCC AGGACGTGAC GCTCTATCCG CTCGAGATCG CCGACGCGCG GCTGACGGGG ATTCCGCCGG ACATCCCGGC GCTCGACCGC TACGTGCCGG CCGGCGCGCA GGTGCGCGGC GCGCTGCGCC TGCGGCTGCG CACGACCGGC AACATGCGCA TCGCCGATCT GCGGGGCCTC GACCGGCTGC CGCTGTATCT CGCGGGCGAC GCTCAGGTGG CCTCGCACCT GTTCGAGCTG CTGCACGTGG CCGGCGTCGC GACGCTCACG GCCGCGCCCG GCGAGTTCGC CGCGCCGGGC CGCCCGCCCG CGGCGGTTAC CGTCGACGCG CTCGCTCACG AAGGGCTCGG CGCCGACGAG GGGCTGTTGC CGCTCACGTG GGCGAAGTTC CATGGGCACA ACCTGCTGCA CGAATACTTC GCGTGCCCGG AGCGCTTCTA TTTCGTCGCG CTGACGGGGC TCGAGGAAGG GTTGCGGCGC ATCGCGGGCA GCGAGGTCGA AATCGTCGTG CTGCTCGAAC AATCGCCCGA GCGGCTCGCG GACGTCGTCG ACGCGTCGCG CTTCGCGCTG TTCTGCACGC CGGTGATCAA CCTGTTTCCG CGCCACATGG ACCGGATCGA ACTGTCGAGC GGGCAGACCG AATGCCATCT GGTGCCGGCC CGCCTCGCGC CGCTCGACTA CGAAGTATTT TCCGTCGAGG CGATGTACGG GCAGGTCGCC GCGACATCGG CCGAACTCGA GTTCCGGCCG CTGTACCAGA CGCTGAACGA CGACGAGAGC AACTATGGAC GCTATTTCTC GACGCGGCGC GAGCGCCGGC TCGTGTCGGA TTTCGCGCGC CGCTACGGCA CGCGCACGCC GTACGTCGGC ACGGAGATGT TCGTATCGCT CGTCGATCAG AACGAGGCGC CCTACAGCGA GGACATCCGC TATCTGTCGG TGGACGCGCT GGTGACGAAC CGCGACCTGC CGAGCCTCGT GCCGCGCGAC GGCGTGCGCG ACCTCACGGC GATCGAATCC GCGCCGATCG ACAGCGTCGG CCTGATCCGC GCGCCGTCCG CGCCGAAGGC GCCGTATGCG GAGCGCGAGA TCGCGTGGCG GCTGATCCGC CAGTTGAACT TCAACTATCT GCCGCTCGAC GAGCTCGACC ATCGCGCGGG CGGACAGGGC CTGCGCGGCC TGCTGCGGCT GTTTCTGGCG GGCGACGAGG CCGACAGCCG GCGGCAGGTG GAAAGCCTTG TCGGCGTGAA GACGCGGCCC GTCACGCGCA AGCTGCCCGG CGCGGGCCCG CTCGTGTTCG GGCGCGGCGT CGAGTGCGCG CTGAGCGTCG ACGAAACGGG CTTCTCCGGC GTGAGCCCGT ATCTGTTCGG GCTCGTGCTC GAGCATTATC TAGCGCGGCA CGTGTCGATC AACGTGTTCA CGCAGACCGA GCTGAACTCG ATCCAGCGCG GCCGCATCGC GCGCTGGCCG GTGCGCATGG GCGCGCGGGG AGGCGCGTGA
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Protein sequence | MDPQLLDYYN QELIYMRELG AEFARAHPKI ARRLGMQAGE VADPYVERLI ESFCFMAARM QIKLDAEFPR FTGRLLEVLY PTYVAPTPSM AVARLYPSRT EGNLAQGFRV ARGTAFAARV PAGEKTACRF RSGQDVTLYP LEIADARLTG IPPDIPALDR YVPAGAQVRG ALRLRLRTTG NMRIADLRGL DRLPLYLAGD AQVASHLFEL LHVAGVATLT AAPGEFAAPG RPPAAVTVDA LAHEGLGADE GLLPLTWAKF HGHNLLHEYF ACPERFYFVA LTGLEEGLRR IAGSEVEIVV LLEQSPERLA DVVDASRFAL FCTPVINLFP RHMDRIELSS GQTECHLVPA RLAPLDYEVF SVEAMYGQVA ATSAELEFRP LYQTLNDDES NYGRYFSTRR ERRLVSDFAR RYGTRTPYVG TEMFVSLVDQ NEAPYSEDIR YLSVDALVTN RDLPSLVPRD GVRDLTAIES APIDSVGLIR APSAPKAPYA EREIAWRLIR QLNFNYLPLD ELDHRAGGQG LRGLLRLFLA GDEADSRRQV ESLVGVKTRP VTRKLPGAGP LVFGRGVECA LSVDETGFSG VSPYLFGLVL EHYLARHVSI NVFTQTELNS IQRGRIARWP VRMGARGGA
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