| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1694 |
|---|
| Symbol | |
|---|
| ID | 3693149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 2067895 |
|---|
| End bp | 2069487 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637731948 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_336851 |
|---|
| Protein GI | 76817264 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGG CGCGAAGGAC GCGCCCGACA CGGCGAACCA CGACAGCGAT GCGGCCTGAG
CGGCCGCCCT ACACCATACC GGGGAAACGA ACCATGAAGA AACAGCAAGC CCAGACGGCC
GCCGCCGGCG TCCAGCCGCA AGCGGATTCG GATTTCGCGC AGTTGCTCGC GCAGGAGTTC
AAGCCGAAGA CGGAGCAGGC GCGCGAAGCG GTCGAATACG CGGTGCGCAC GCTCGCCGAG
CAGGCGCTCG CGCAATCGGC GACGATCAGC GACGATGCAT ACAAGAGCAT CGCCGCGATC
ATCGCGCAGA TCGACCATAA GCTATCCGAA CAGATCAACC TGATCCTCCA TCACGCGGAT
TTCCAGAAGC TCGAATCGGC GTGGCGCGGG CTGCATCACC TGGTGTCGAA CACCGAGACC
GACGAGCGCC TGAAGATCCG CTTCATGGAC ATCTCGAAGG AAGAGCTGCG CCGCACGATG
CGGCGCTACA AGGGGCAATC GTGGGACCAG AGCCCGCTCT TCAAGCAGAT CTACGAGGAG
GAGTACGGGC AGCTCGGCGG CGAGCCGTAC GGCTGCCTCG TCGCCGATTA CTACTTCGAC
CACACGCCGC CCGACGTCGA CCTGCTCGGC TCGATCTCGA AGGTGGCCGC GTCCGCGCAC
ACGCCGTTCC TCTCCGGCGC GTCGCCTTCG GTGCTGCAGA TGGAATCGTG GCAGGAGCTC
GCGAACCCGC GCGACCTGAC GAAGATCTTC ACGCAAAACC TCGAATACGC GTCATGGAAC
GCGCTGCGCA ACATGGACGA CGCGCGCTAC ATCGGCCTCG CGATGCCGCG CTTCCTGTCG
CGCCTGCCGT ACGGCGTGCT GACGAATCCC GTCGACGAGT TCGACTTCGA GGAAGACACG
AACGGCGCCG ACCATCGCCG CTATGCGTGG ACGAACGCCG CCTACGCGAT GGGCGTGAAC
ATCAACCGGT CGTTCCGGCT CTACGGCTGG TGCTCGCTCA TTCGCGGCGT CGAATCGGGC
GGCACGGTCG AGAACCTGCC GTGCCATACG TTCCCGACCG ACGACGGCGG CATCGACATC
AAATGCCCAA CCGAGATCGC GATCTCGGAC CGGCGCGAGG CGGAGCTGTC GAAGAACGGC
TTCATTCCGC TCGTGCACCG CAAGAACACC GATCACGCGA CGTTCATCGG CGCGCAATCG
CTGCACAAGC CGGCCGAATA CGACGATTCC GACGCGACGG CCAACGCGAA TCTGTCGGCG
CGCCTGCCGT ATCTGTTCGC ATGCTCGCGC TTCGCGCACT ACCTGAAGTG CATCGTGCGC
GACAAGGTGG GCGCCTTCAA GGAGCGCGAG GACATGCAGC GCTGGCTGAA CGAATGGATC
ATGAACTACG TCGACGCGGA CCCGGCGAAC TCGTCGCAGG ACACGAAGGC GCGCCGGCCG
CTCGCGGCCG CCGAGGTGGT CGTCGAGCAG GCGCAGGGCA ACCCCGGCTA CTACCAGGCG
AAGTTCTTCC TGCGGCCGCA TTTCCAGCTC GAGGGCCTGA CCGTGTCGCT GCGGCTCGTC
GCGAAGCTGC CGTCGATCAA GGAAGCCGCC TGA
|
|---|
| Protein sequence | MRAARRTRPT RRTTTAMRPE RPPYTIPGKR TMKKQQAQTA AAGVQPQADS DFAQLLAQEF
KPKTEQAREA VEYAVRTLAE QALAQSATIS DDAYKSIAAI IAQIDHKLSE QINLILHHAD
FQKLESAWRG LHHLVSNTET DERLKIRFMD ISKEELRRTM RRYKGQSWDQ SPLFKQIYEE
EYGQLGGEPY GCLVADYYFD HTPPDVDLLG SISKVAASAH TPFLSGASPS VLQMESWQEL
ANPRDLTKIF TQNLEYASWN ALRNMDDARY IGLAMPRFLS RLPYGVLTNP VDEFDFEEDT
NGADHRRYAW TNAAYAMGVN INRSFRLYGW CSLIRGVESG GTVENLPCHT FPTDDGGIDI
KCPTEIAISD RREAELSKNG FIPLVHRKNT DHATFIGAQS LHKPAEYDDS DATANANLSA
RLPYLFACSR FAHYLKCIVR DKVGAFKERE DMQRWLNEWI MNYVDADPAN SSQDTKARRP
LAAAEVVVEQ AQGNPGYYQA KFFLRPHFQL EGLTVSLRLV AKLPSIKEAA
|
|---|
| |