Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1687 |
Symbol | ptxR |
ID | 3693656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 2057672 |
End bp | 2059033 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637731941 |
Product | LysR family regulatory protein |
Protein accession | YP_336844 |
Protein GI | 76819569 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATTCCG CAATTATGAT TGCCGCCGCA TCGCATTGCG TTGCCGATGA ACCGATTGCC GCGCATGAAG AACCAGGGCC GCGACGCGTA CCGGCCCGCC CGGGCCCGCT TGCGCGGCGC GCGCATGCGA AGCGAAACGA AGCCGGCGGC CGCCGCATCG GCGACGCCGC ACGCCCAATC CGCGCGCCGG CGGCAGCGAG CCGCGCCGCG CGCGTTCGCG CCCGCCCGAG GTGGCGCCCG CCCACGATAC GCTGCGTCGC CCCTCCCGCA TGCGGCGCAA CAGCCATCGT CCCGATCCAT ATCCAGCACC GGGCTCATGT CGCCGAATCG CGATGCAGCG CCCGCGCGAC ATCGGCGCCT CGCCCGCGAA CGGGCGAGCG CCGCTCGGTA TTTCGAAACA TGACCGTTCT TGAGGTGGGA AATATGTCCG AGGTGGGGAT AAGAAATTTG AATCACCTGC GCGTTTTCAT GGCGATCGTC GAGAAGGGCA GCTTCACTGC GGCGGCCGAA TGCCTGAGCA TGTCGAAATC ACTGGTCAGC GAATACCTGA GCCGCCTCGA AGCCGAGATC GACACGCAGC TCGTGATGCG CAGCACCCGC CGGATCGCGC CGACCGACGC CGGCAACAAG CTGTATTGCG CGTCGCAGGC GTTCGTGAGC GGCCTGTACG ACGTGATCGG CAGCATCCGC TGCTTGCGCC ACGAATCGAC CGGCCTGTTG CGCGTCGCGG CGCCGAGCGG CTTTTCCACC ACGCATCTGA GCTCGATCGC CGCGACCTTC ATTCATCAGC ATCCGCAGAT CGAGCTCGAG ATCGTCTGCA ACGACGACGA GATCGATCTG GTGGGCGAGC GCGTCGATCT CGCGTTCGAA ACCGGATGGC CCAAGAAGAA GGGCTTCCGG ATGAAGATGC TCGGCGCATT CGATCAGGTG CTCGTCGCGT CGCCCGAGTA TGCGCGCAGG CACGCGGTGC CGCGGCATCC GGACGATCTG CCCGGCTCGC ACTGGATCGG GCACGGCGGG CTCGCCAATC TCAGCTATTC GGTGTTCGGC AATGAGGAGC GATCGGTCCG GATTCAGACC CCCGGGCGCC TGAAGGTGAA GAGCGTGCTG CTCGCGCATC AGATGGCGCT CGCCGGCGCG GGCATCAGTG CGTTTCCCGA TTATCTGGTC GCCGAGGATC TGCGCGAAGG GCGCCTGCAT CGGCTGCTGC CGACGTGGAC GATGCCGAAG GGCGGCATCT ACGCGTTTCG CACGGCGCCG CGGCAGGCGT CGGTTCGCGA GCGCCTGTTT CTCGCCGCGG TCCAGGCGTA TCTGGCCGGC CTGTGCGGCG AGCACGCGCG CGCGGGCGCG GTCCCGACCT AG
|
Protein sequence | MNSAIMIAAA SHCVADEPIA AHEEPGPRRV PARPGPLARR AHAKRNEAGG RRIGDAARPI RAPAAASRAA RVRARPRWRP PTIRCVAPPA CGATAIVPIH IQHRAHVAES RCSARATSAP RPRTGERRSV FRNMTVLEVG NMSEVGIRNL NHLRVFMAIV EKGSFTAAAE CLSMSKSLVS EYLSRLEAEI DTQLVMRSTR RIAPTDAGNK LYCASQAFVS GLYDVIGSIR CLRHESTGLL RVAAPSGFST THLSSIAATF IHQHPQIELE IVCNDDEIDL VGERVDLAFE TGWPKKKGFR MKMLGAFDQV LVASPEYARR HAVPRHPDDL PGSHWIGHGG LANLSYSVFG NEERSVRIQT PGRLKVKSVL LAHQMALAGA GISAFPDYLV AEDLREGRLH RLLPTWTMPK GGIYAFRTAP RQASVRERLF LAAVQAYLAG LCGEHARAGA VPT
|
| |