Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1678 |
Symbol | |
ID | 3693833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2046587 |
End bp | 2049454 |
Gene Length | 2868 bp |
Protein Length | 955 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637731932 |
Product | alpha-1,2-mannosidase family protein |
Protein accession | YP_336835 |
Protein GI | 76819003 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3537] Putative alpha-1,2-mannosidase |
TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGTCG CTTGCGCGCT CACAGCTTGT GGAGGGGATG ACGGCGGTCC CGCCGTGGCG GCGTCCTCGT TCGCCGCGGC GGGCGCGAAC GGCGCCACGG CCGGCGTGGC CGACACGGCG CAAGCGGACG GCGCGCCGCG CACCGGCTCG CTGACGCAAT ATGTCGATCC GCTGATCGGC ACGCTCGCGA GCAATTCGCC GAACCCGGTG CCGGCCGGGC AGGCGGGCAG CGTGGTGCCG GCCGCGGGTC TGCCGTCGGG CATGATCCAG TGGGCGCCCG ACACGAACAC GACTCCCGCG CCCGCCGACA GCAAGGAGCC CGGCTCCCCC GCCGGCTACT ACTACGATCT GAACGCGATT CAGGGCTTCA GCGTCACGCA CATGAGCGGC GCGGGCTGCG CCGGCAACAA CGGCGAATTT CCGGTGATGC CGACCACCGA CGCGACGAAG CTCGCGCCGA CCTTCAGCCA TGCGAATGAA ACGGCGAAGC CCGGCTATTA CTCGGTGCTG CTCGACTCGC AGATCAAGGT CGAGCTGACG GCGACGCTGC GCACCGGCTT CGGCCGCTTC GCGTATCCGG CCGGCAAGCC CGCGCTGCTC GTGATCGACG CGACGCGCAC GAACACGAAG ACGTCGACGA GCGGCGCGAT CACGCGCGTA TCGGCGAACG CGATTTCCGG CAGCACGGTG GGCGGCGGCT TCTGCGGCAA TTCGGTGCCG GTGCCCGTGT ATTTCTACGC GACGTTCGAT CGGCCGTTCG CACCGGCTTC GTCGATCTCG CGCGGCATCG CGAAGCTCGC GTTCGACTCG GGCGCGACCG TGCGGATGAA GATCGGGATT TCGTACGTGA GCGTCGATAA CGCGAAGGCG AATCTCGACG CGGAAAACCG CACGTGGGAC TTCGACGGCG TGCGCGCGCT CGCCGACGCG GCTTGGAACG ACCGGCTCGG CGCGATCCGC GTGTCGAGCA GCGATGCCGA CGCGCTGAAG AAGTTCTATA CCGCGTTCTA TCACGCCCTG TGGGCGCCGA GCGTGTTCAG CGACGTCAAC GGCCAGTACA TCGGCTTCGA CAAGCAGGTG CACACGGTCG CGAAAGGCCA GGCCGCCCAG TATTCGAGCT TCTCGGGCTG GGATGTCTAC CGTTCGCTGA TCCAGCTGAA AGCGGTGCTG TTCCCGCGCG AGACGAGCGA CATGATCCAG TCGCTCGTCA ACGACGCGGA CCAATGCGGC GCGATTCCAC ACTGGGTGAA CGACAACGTC GAGGATGGCG TGATGCCGGG CGACGCCGGT TCGCTGATGG TGTCGAGCGC ATACGCGTTC GGCGCGCGCG AGTTCGACGC GCGCGGCGCG CTCGCGCACA TGATCAGGAT GGCGAATATT CCCGGCACCG CGTGCGCGGG CGTGACGACC AACGGCGGAC GCGCGAGCTA TCTGCAGACG GGCTACATCA CGAGCGGAGA ATGGGGAATC GCGTCGTCGA CGCTCGAATA CACGAGCAGC GATTTCGCGA TCTCGCGCTT CGCGCTCGCG CTCGGCGACA CCGCGACGCA GAAGATGCTG CTCGGGCGCT CGGCATACTG GCAGAACCTG CTGAACGCAT CGCTGAATCC GCCGCTGATC GCCGCGCGCC AGTCGAACGG CGCATGGATC GCCGAGACGC CGGGCAGCAC CGACAACTAC GTCGAGGGCA ACGCCGAGCA ATACACGTGG ATGGTGCCGT ACGATCCCGC CGGCCTGTTC ACGCAGCTTG GCGGCAATCA GGCGGTCGTG CCGCGGCTCG ACAAGTTCTT CACGGTGCTG AACGCGGGGA TGAGCCTGCC GAATTTCTAC ATGGGCAACG AGCCGACCTT CGAGGTGCCG TGGCTGTACA ACTGGGCGGG CTCGCCGTCC GGCACGCAGC GCGTCGTCCG GCAGATCATG CAGACCGCGT TCAGCACGAA GCCCGACGGG CTGCCCGGCA ACGACGATCT CGGCGCGGTG TCCGGCTGGT ACGTATGGGC CGCGCTCGGG CTGTATCCGC AGGTTCCGGG CGTCGCGGGC TTCGCGATCG GCAGTCCGCA ATTCGATGCG ATCGATGTGC GGCTCGGCAG CGGCAGGATG CTGAAGATCC GCGCGCCGGG CGCGCCCGCA TCGGGCTACG TGCAGAGCGT CGCCGTGAAC GGCCGCGCGC AGGCGAGCCC GTGGATCGCG CTCGATGCGC TCGACGGCGG CGCGGTGATG CACTTCAAGA TGGGCGGCGC GCCGTCGCAA TGGGGCGCGG GCGAGGCGCC GCCGTCGTTC GGCGTGCCGG TCGCGCGCGA TGTGGCGGAC AGCTTCAACA ATCGCGGCAT CAGCGCGGAC GGCGCGACGA ACGCCGACGG CCAGGGCGCC GATTTCGACG GCAGCCTGTT CAGCTACTCG GCGAACGCGC TCGCGCAGGC GGGCGTGCGG CCCGGCGCGC CGTTCACGTA CGGCGGCGCG AGCTTCGTGC TCGGCGGCGC GTCGTCGCTC GACAATGCGG TGGCGGTCGG GCAGACCGTG ATGCTGCCGC CGGGCTCGGC GGGCACGAGT GTCGTCGTGC TCGGCGCGTC GAACAACGGG CCCAGCGCGG GCGTCGCGCG CGTGAGCTTC GCGGACGGGA CGAGCGCGCA GGTCACGCTG TCGTTCGACG ATTGGACGCT GAACGGCGGC AGCACGGGCG CGACATCGGC GATCGCGGTG ACGAGCGCCT ACCGCAATGC CGGCAACGGC CAGAAAGACA ACGTGAAAAC CTACATCTTC GCGCAGAAGA TTCCGGTGCC GGCCGGCAAG GTCGTGACGA GCGTCACGCT GCCGAGGCAG GTAAGCGCCG GCAAGATGCA CGTGTTCGGC ATCGGCGTCG CGGCCTGA
|
Protein sequence | MAVACALTAC GGDDGGPAVA ASSFAAAGAN GATAGVADTA QADGAPRTGS LTQYVDPLIG TLASNSPNPV PAGQAGSVVP AAGLPSGMIQ WAPDTNTTPA PADSKEPGSP AGYYYDLNAI QGFSVTHMSG AGCAGNNGEF PVMPTTDATK LAPTFSHANE TAKPGYYSVL LDSQIKVELT ATLRTGFGRF AYPAGKPALL VIDATRTNTK TSTSGAITRV SANAISGSTV GGGFCGNSVP VPVYFYATFD RPFAPASSIS RGIAKLAFDS GATVRMKIGI SYVSVDNAKA NLDAENRTWD FDGVRALADA AWNDRLGAIR VSSSDADALK KFYTAFYHAL WAPSVFSDVN GQYIGFDKQV HTVAKGQAAQ YSSFSGWDVY RSLIQLKAVL FPRETSDMIQ SLVNDADQCG AIPHWVNDNV EDGVMPGDAG SLMVSSAYAF GAREFDARGA LAHMIRMANI PGTACAGVTT NGGRASYLQT GYITSGEWGI ASSTLEYTSS DFAISRFALA LGDTATQKML LGRSAYWQNL LNASLNPPLI AARQSNGAWI AETPGSTDNY VEGNAEQYTW MVPYDPAGLF TQLGGNQAVV PRLDKFFTVL NAGMSLPNFY MGNEPTFEVP WLYNWAGSPS GTQRVVRQIM QTAFSTKPDG LPGNDDLGAV SGWYVWAALG LYPQVPGVAG FAIGSPQFDA IDVRLGSGRM LKIRAPGAPA SGYVQSVAVN GRAQASPWIA LDALDGGAVM HFKMGGAPSQ WGAGEAPPSF GVPVARDVAD SFNNRGISAD GATNADGQGA DFDGSLFSYS ANALAQAGVR PGAPFTYGGA SFVLGGASSL DNAVAVGQTV MLPPGSAGTS VVVLGASNNG PSAGVARVSF ADGTSAQVTL SFDDWTLNGG STGATSAIAV TSAYRNAGNG QKDNVKTYIF AQKIPVPAGK VVTSVTLPRQ VSAGKMHVFG IGVAA
|
| |